ARC Centre of Excellence for Plant Energy Biology

MPIC — mtHSP70 RNA Expression

RNA transcript expression levels are shown for Arabidopsis and rice, representing models of gene expression across plant development based on a range of publically-available microarray datasets (see MPIC paper for details).

Heatmap scale (natural logarithm) 2 7 12 Global expression heatmaps (Excel): Arabidopsis Rice
Arabidopsis RNA Transcript Expression  
Locus AT4G37910AT5G09590
Probe Set ID 253013_at250502_at
Developmental Expression Silique, Seed, Germination, Seedling, Leaf, Stem, Flower, RootSilique, Seed, Germination, Seedling, Leaf, Stem, Flower, Root
No. of tissues expressed in 73 of 7372 of 73
Stress expression Control, Drought, Salt, Cold, HeatControl, Drought, Salt, Cold, Heat
flower 2 10.538509.88960
flower, stage 9 10.6833010.14090
flower, stage 10/11 10.341209.65669
flower, stage 12 10.550709.53555
flower, stage 12, sepals 10.8920010.77060
flower, stage 12, petals 10.5075011.96310
flower, stage 12, stamens 9.8544010.20130
flower, stage 12, carpels 10.7911011.81610
flower, stage 15 10.214009.30975
flower, stage 15, pedicels 10.015508.52508
flower, stage 15, sepals 10.8283010.41850
flower, stage 15, petals 10.2834010.27750
flower, stage 15, stamen 9.265419.58675
flower, stage 15, carpels 10.6357010.39290
mature pollen 9.459488.65383
cotyledon 9.708118.82448
silique, with seeds stage 3; mid globular to early heart embryo 9.316368.93781
silique, wth seeds stage 4; early to late heart embryo 9.782779.55426
silique, with seeds stage 5; late heart to mid torpedo embryo 9.559539.39566
seed, stage 6; mid to late torpedo embryos 9.136309.89103
seed, stage 7; late torpedo to early walking-stick embryo 8.8394610.30690
seed, stage 8; walking-stick to early curled-cotyledons embryo 8.5993811.48080
seed, stage 9; curled-cotyledons to early green-cotyledons embryo 8.9573512.26690
seed, stage 10; green-cotyledons embryo 8.8913512.32010
Germination - Harvested seed, collected before dessication 10.0609012.44060
Germination - 0 h dry seed, 15d after collection 9.9114612.22720
Germination - 1 h strat 10.6202013.35240
Germination - 12 h strat 11.0764013.07170
Germination - 48 h strat 13.0455012.32740
Germination - 1 h SL 13.1870012.83450
Germination - 6 h SL 13.9173012.55480
Germination - 12 h SL 13.3633011.68950
Germination - 24 h SL 12.8983011.54130
Germination - 48 h SL 12.0311010.69240
hypocotyl 10.392909.42883
seedling, green parts 11.1281010.29620
seedling, green parts 9.763008.33405
seedling, green parts 9.921739.51256
seedling, green parts 9.411958.18080
seedling, green parts 9.559149.05158
shoot apex, vegetative + young leaves 10.991109.71797
leaves 1 + 2 10.403708.62709
shoot apex, vegetative 11.3057010.19850
shoot apex, transition (before bolting) 11.1378010.21820
shoot apex, inflorescence (after bolting) 11.2387010.19010
rosette leaf #4, 1 cm long 10.784309.30976
rosette leaf # 2 9.274228.40171
rosette leaf # 4 9.412248.46744
rosette leaf # 6 9.674698.67004
rosette leaf # 8 9.900088.60399
rosette leaf # 10 9.988258.64526
rosette leaf # 12 10.424108.88846
leaf 7, petiole 9.940678.71432
leaf 7, proximal half 9.725748.59202
leaf 7, distal half 9.477248.47880
developmental drift, entire rosette after transition to flowering, but before bolting 10.008308.96039
developmental drift, entire rosette after transition to flowering, but before bolting 9.920009.02639
developmental drift, entire rosette after transition to flowering, but before bolting 9.995569.12248
senescing leaf 9.532109.72303
cauline leaf 9.035058.64447
vegetative rosette 10.379709.22518
vegetative rosette 10.736909.41146
vegetative rosette 10.932909.59953
leaf 9.492438.39901
stem, 2nd internode 8.743137.57914
stem, 1st node 9.339528.05559
root 10.689109.70844
root 10.630809.78332
root 10.6987010.32150
root 10.899909.03756
roots 10.5430010.13340
root 10.1729010.10410
root 10.1709010.09700
Rice RNA Transcript Expression  
Locus LOC_Os02g02410.1LOC_Os02g53420.1LOC_Os03g02260.1LOC_Os03g16920.1LOC_Os05g23740.1LOC_Os05g38530.1LOC_Os09g31486.1LOC_Os12g14070.1
Probe Set ID Os.1311.1.S1_atOs.10873.1.S1_atOs.6308.1.S1_atOsAffx.12887.2.S1_s_atOs.9688.1.S1_atOs.38581.1.S1_s_atOs.25736.1.S1_atOs.7977.1.S1_at
Developmental Expression Seed, Germination, Seedling, Germination (N), Seedling (N), Seedling (A/N switches), Leaf, Root, FlowerSeed, Germination, Seedling, Germination (N), Seedling (N), Seedling (A/N switches), Leaf, Root, FlowerSeed, Germination, Seedling, Germination (N), Seedling (N), Seedling (A/N switches), Leaf, Root, FlowerSeed, Germination, Seedling, Germination (N), Seedling (N), Seedling (A/N switches), Leaf, Root, FlowerSeed, Germination, Seedling, Germination (N), Seedling (N), Seedling (A/N switches), Leaf, Root, FlowerSeed, Germination, Seedling, Germination (N), Seedling (N), Seedling (A/N switches), Leaf, Root, FlowerSeed, Germination, Seedling, Germination (N), Seedling (N), Seedling (A/N switches), Leaf, Root, FlowerSeed, Germination, Seedling, Germination (N), Seedling (N), Seedling (A/N switches), Leaf, Root, Flower
No. of tissues expressed in 41 of 4141 of 4141 of 4126 of 4141 of 4140 of 4141 of 4141 of 41
Stress expression Control (D,S,C), Drought, Salt, Cold, Control (H), HeatControl (D,S,C), Drought, Salt, Cold, Control (H), HeatControl (D,S,C), Drought, Salt, Cold, Control (H), HeatDrought, Salt, Control (H), HeatControl (D,S,C), Drought, Salt, Cold, Control (H), HeatControl (D,S,C), Drought, Salt, Cold, Control (H), HeatControl (D,S,C), Drought, Salt, Cold, Control (H), HeatControl (D,S,C), Drought, Salt, Cold, Control (H), Heat
Young inflorescence (P1, upto 3 cm) 10.8786211.749999.454803.810109.126897.845499.969069.09019
Inflorescence (P2, 3-5 cm) 11.2925311.767389.608423.484708.629538.3758810.305579.39654
Inflorescence (P3, 5-10 cm) 11.2401911.300488.672303.335928.561158.617339.528549.58700
Inflorescence (P4, 10-15 cm) 10.8339010.949088.001703.399388.157997.893409.171509.16791
Inflorescence (P5, 15-22 cm) 11.1026111.205388.206514.824478.715805.445329.271258.75238
Inflorescence (P6, 22-30 cm) 10.9642011.139329.026007.168879.175738.7169910.9135410.27122
Unpollenated stigma at antithesis 13.2731711.9722410.709842.9425511.5421710.6083811.1991910.19338
Ovary at antithesis 11.3635812.6341810.406772.5903911.079239.1402811.747909.61078
Embryo. 12.3244911.8049210.643987.802269.206556.3275910.0684610.96092
Endosperm. 13.5084511.362079.4893010.7083411.428268.821799.7197814.06650
Seed (S1, 0-2 days after pollenation) 12.7705510.6810410.1005212.822889.6731111.1328510.688249.44725
Seed (S2, 3-4 days after pollenation) 11.4296710.230928.1634410.864519.4688810.013679.1904511.49188
Seed (S3, 5-10 days after pollenation) 12.618309.793569.6847412.8685010.0632211.258479.0840712.31132
Seed (S4, 11-20 days after pollenation) 12.3639910.008259.9755512.876659.1330310.878058.4384512.33303
Seed (S5, 21-29 days after pollenation) 10.5838111.2500611.1537612.950228.969589.897169.4566111.51402
Dry seed 9.5336112.2108111.9094013.1684710.4758911.2376811.599009.54723
1h seed (aerobic) 9.3878412.1260411.7769913.2193010.3565511.0808811.437609.29191
1h seed (anaerobic) 9.4486812.2355611.8230513.3022810.5098211.2133211.524619.43382
3h seed (aerobic) 10.6128911.7132211.0087012.635059.9634010.6329411.761229.52127
3h seed (anaerobic) 9.3539011.8757011.2819212.942299.9627510.6177511.490929.22279
12h seed (aerobic) 12.1043011.741679.540107.420399.568778.1923112.184929.37153
12h seed (anaerobic) 12.1758511.816519.684108.837029.914979.4707612.465389.22861
24h (aerobic) 11.8517011.189579.261054.318959.268577.7231512.180569.15218
24h seed (anaerobic) 11.8155011.116698.901065.857619.225218.5004111.832728.96886
27h (aerobic) 11.7232911.190109.007144.444329.230725.9896312.345158.84255
27h (anaerobic) 11.8601311.212158.433055.652819.122887.1569511.964429.20967
30h (aerobic) 11.8726411.198388.915663.411199.165805.8784012.221258.85781
30h (anaerobic) 11.9284711.064748.453364.936279.094817.3798111.830048.97426
27h (24h N + 3h A) 11.7285911.507029.315895.363779.522507.5260912.751449.30629
27h (24h A + 3h N) 11.6157511.142678.890053.539298.852475.9955112.126708.39347
30h (24h N + 6h A) 11.7167411.374709.208124.528459.371706.6628812.553918.91572
30h (24h A + 6h N) 11.7702511.222059.186373.885909.182146.8395211.936758.83136
Aerobic grown coleoptiles (4 days) 11.438718.441535.880513.196545.883634.935936.933838.01380
Anoxic grown coleoptiles (4 days) 9.941999.198586.785905.246356.601787.112459.795098.00519
10-day old seedling 12.5288511.8096211.148188.9577510.546099.929879.456419.81695
Leaf from 7-day seedling 11.5157411.826799.117724.8607710.258847.366268.4786210.48528
Mature leaf 11.7093710.716338.353943.7369011.189277.108629.5823410.18904
Young Leaf 12.4980411.791579.441155.9361011.269775.8468210.5683310.02676
Semi Apical Meristem 11.4530312.2743810.148082.692549.564392.9618010.399388.48993
Root from 7-day old seedling 12.3416911.697299.307353.615938.537995.8150710.950108.82326
Root from 7-day Seedling 12.2765512.3573610.517246.991128.703779.4577910.793979.47985