ARC Centre of Excellence for Plant Energy Biology

MPIC — mtHSP10 RNA Expression

RNA transcript expression levels are shown for Arabidopsis and rice, representing models of gene expression across plant development based on a range of publically-available microarray datasets (see MPIC paper for details).

Heatmap scale (natural logarithm) 2 7 12 Global expression heatmaps (Excel): Arabidopsis Rice
Arabidopsis RNA Transcript Expression  
Locus AT1G14980AT1G23100
Probe Set ID 260714_at264895_at
Developmental Expression Silique, Seed, Germination, Seedling, Leaf, Stem, Flower, RootSilique, Seed, Germination, Seedling, Leaf, Stem, Flower, Root
No. of tissues expressed in 73 of 7357 of 73
Stress expression Control, Drought, Salt, Cold, HeatControl, Drought, Salt, Cold, Heat
flower 2 11.584207.25046
flower, stage 9 11.872307.19625
flower, stage 10/11 11.338306.56307
flower, stage 12 11.555306.39940
flower, stage 12, sepals 10.913606.80084
flower, stage 12, petals 11.607906.26927
flower, stage 12, stamens 10.286406.43168
flower, stage 12, carpels 12.198407.28159
flower, stage 15 10.853506.08998
flower, stage 15, pedicels 10.586005.66478
flower, stage 15, sepals 10.164706.46267
flower, stage 15, petals 10.254105.68622
flower, stage 15, stamen 9.562635.23913
flower, stage 15, carpels 11.805206.93832
mature pollen 9.141156.88442
cotyledon 10.060305.87818
silique, with seeds stage 3; mid globular to early heart embryo 10.718306.06022
silique, wth seeds stage 4; early to late heart embryo 10.764505.76653
silique, with seeds stage 5; late heart to mid torpedo embryo 10.713005.62380
seed, stage 6; mid to late torpedo embryos 10.698806.12703
seed, stage 7; late torpedo to early walking-stick embryo 10.633206.39952
seed, stage 8; walking-stick to early curled-cotyledons embryo 11.230706.02942
seed, stage 9; curled-cotyledons to early green-cotyledons embryo 11.236206.21842
seed, stage 10; green-cotyledons embryo 11.341105.96770
Germination - Harvested seed, collected before dessication 13.762507.83140
Germination - 0 h dry seed, 15d after collection 13.939307.71314
Germination - 1 h strat 13.135007.71230
Germination - 12 h strat 12.835707.68914
Germination - 48 h strat 13.843809.27686
Germination - 1 h SL 14.358809.61049
Germination - 6 h SL 15.3351010.98780
Germination - 12 h SL 15.0747010.40020
Germination - 24 h SL 14.781509.50306
Germination - 48 h SL 13.733607.87462
hypocotyl 11.513006.66950
seedling, green parts 10.977406.30293
seedling, green parts 10.323205.46266
seedling, green parts 11.200305.69048
seedling, green parts 10.348205.24386
seedling, green parts 10.685504.89830
shoot apex, vegetative + young leaves 12.100507.60278
leaves 1 + 2 10.983806.48093
shoot apex, vegetative 12.490608.01150
shoot apex, transition (before bolting) 12.611207.70036
shoot apex, inflorescence (after bolting) 12.528007.55306
rosette leaf #4, 1 cm long 11.384607.34897
rosette leaf # 2 10.193205.25579
rosette leaf # 4 10.255205.41233
rosette leaf # 6 10.442205.67740
rosette leaf # 8 10.755906.16341
rosette leaf # 10 11.066806.28486
rosette leaf # 12 11.559307.05173
leaf 7, petiole 11.007606.17783
leaf 7, proximal half 10.512505.85690
leaf 7, distal half 10.075805.32184
developmental drift, entire rosette after transition to flowering, but before bolting 10.904406.11645
developmental drift, entire rosette after transition to flowering, but before bolting 10.990505.96374
developmental drift, entire rosette after transition to flowering, but before bolting 11.035306.15011
senescing leaf 9.786845.06423
cauline leaf 9.330174.84826
vegetative rosette 11.012706.86101
vegetative rosette 11.256306.85024
vegetative rosette 11.648707.34844
leaf 10.591405.67110
stem, 2nd internode 9.308064.44874
stem, 1st node 10.206105.17102
root 11.803407.64308
root 11.492206.72814
root 11.904907.12285
root 12.335508.25506
roots 12.196508.04607
root 11.181406.16647
root 11.420806.24475
Rice RNA Transcript Expression  
Locus LOC_Os03g25050.1LOC_Os07g44740.1
Probe Set ID OsAffx.13014.1.S1_s_atOs.12190.1.S1_at
Developmental Expression Seed, Germination, Seedling, Germination (N), Seedling (N), Seedling (A/N switches), Leaf, Root, FlowerSeed, Germination, Seedling, Germination (N), Seedling (N), Seedling (A/N switches), Leaf, Root, Flower
No. of tissues expressed in 41 of 4141 of 41
Stress expression Control (D,S,C), Drought, Salt, Cold, Control (H), HeatControl (D,S,C), Drought, Salt, Cold, Control (H), Heat
Young inflorescence (P1, upto 3 cm) 9.6673311.20686
Inflorescence (P2, 3-5 cm) 10.4545911.84683
Inflorescence (P3, 5-10 cm) 9.5515411.37714
Inflorescence (P4, 10-15 cm) 9.0399610.55300
Inflorescence (P5, 15-22 cm) 9.2071211.12235
Inflorescence (P6, 22-30 cm) 9.2486011.38012
Unpollenated stigma at antithesis 10.7156912.93531
Ovary at antithesis 10.4253812.89340
Embryo. 11.0780113.64506
Endosperm. 11.1551113.31024
Seed (S1, 0-2 days after pollenation) 9.2070910.97167
Seed (S2, 3-4 days after pollenation) 8.8111310.72052
Seed (S3, 5-10 days after pollenation) 8.9198511.26136
Seed (S4, 11-20 days after pollenation) 7.3434010.06042
Seed (S5, 21-29 days after pollenation) 7.773979.97867
Dry seed 9.7614511.52037
1h seed (aerobic) 9.6241011.40018
1h seed (anaerobic) 9.7637611.53234
3h seed (aerobic) 9.3136611.33744
3h seed (anaerobic) 9.6436411.42336
12h seed (aerobic) 11.0165112.43653
12h seed (anaerobic) 11.4359012.55315
24h (aerobic) 11.3782812.63015
24h seed (anaerobic) 11.2526412.43938
27h (aerobic) 11.5570112.76252
27h (anaerobic) 11.1919812.43997
30h (aerobic) 11.5359012.76800
30h (anaerobic) 11.1496512.49582
27h (24h N + 3h A) 11.7688912.93676
27h (24h A + 3h N) 11.2937912.46744
30h (24h N + 6h A) 11.7887812.93242
30h (24h A + 6h N) 11.3759512.57203
Aerobic grown coleoptiles (4 days) 7.073479.58792
Anoxic grown coleoptiles (4 days) 9.7408810.67934
10-day old seedling 9.5699911.93086
Leaf from 7-day seedling 8.5502511.31054
Mature leaf 4.7972510.25121
Young Leaf 4.8952610.63914
Semi Apical Meristem 10.2220413.08975
Root from 7-day old seedling 10.3022112.97399
Root from 7-day Seedling 10.8277213.32695