MPIC
RNA transcript expression levels are shown for Arabidopsis and rice, representing models of gene expression across plant development based on a range of publically-available microarray datasets (see MPIC paper for details).
| Heatmap scale (natural logarithm) | 2 | 7 | 12 | Global expression heatmaps (Excel): Arabidopsis Rice |
No At expression data.
| Rice RNA Transcript Expression | |
|---|---|
| Locus | LOC_Os04g44550.1 |
| Probe Set ID | Os.53502.1.S1_at |
| Developmental Expression | Seed, Germination, Seedling, Germination (N), Seedling (N), Seedling (A/N switches), Leaf, Root, Flower |
| No. of tissues expressed in | 40 of 41 |
| Stress expression | Control (D,S,C), Drought, Salt, Cold, Control (H), Heat |
| Young inflorescence (P1, upto 3 cm) | 8.17510 |
| Inflorescence (P2, 3-5 cm) | 7.81715 |
| Inflorescence (P3, 5-10 cm) | 8.11541 |
| Inflorescence (P4, 10-15 cm) | 7.45762 |
| Inflorescence (P5, 15-22 cm) | 5.89918 |
| Inflorescence (P6, 22-30 cm) | 8.99914 |
| Unpollenated stigma at antithesis | 6.55765 |
| Ovary at antithesis | 6.04459 |
| Embryo. | 6.32041 |
| Endosperm. | 6.52481 |
| Seed (S1, 0-2 days after pollenation) | 8.15535 |
| Seed (S2, 3-4 days after pollenation) | 6.48611 |
| Seed (S3, 5-10 days after pollenation) | 6.74296 |
| Seed (S4, 11-20 days after pollenation) | 6.62162 |
| Seed (S5, 21-29 days after pollenation) | 6.97257 |
| Dry seed | 7.73392 |
| 1h seed (aerobic) | 8.02446 |
| 1h seed (anaerobic) | 7.89567 |
| 3h seed (aerobic) | 8.70412 |
| 3h seed (anaerobic) | 8.35969 |
| 12h seed (aerobic) | 7.64765 |
| 12h seed (anaerobic) | 7.63484 |
| 24h (aerobic) | 7.02540 |
| 24h seed (anaerobic) | 6.95409 |
| 27h (aerobic) | 7.27681 |
| 27h (anaerobic) | 7.44260 |
| 30h (aerobic) | 7.15419 |
| 30h (anaerobic) | 7.38167 |
| 27h (24h N + 3h A) | 7.99681 |
| 27h (24h A + 3h N) | 7.50263 |
| 30h (24h N + 6h A) | 7.53677 |
| 30h (24h A + 6h N) | 7.27443 |
| Aerobic grown coleoptiles (4 days) | 5.18769 |
| Anoxic grown coleoptiles (4 days) | 6.47980 |
| 10-day old seedling | 7.55981 |
| Leaf from 7-day seedling | 6.82389 |
| Mature leaf | 8.68337 |
| Young Leaf | 8.35592 |
| Semi Apical Meristem | 5.60499 |
| Root from 7-day old seedling | 6.19651 |
| Root from 7-day Seedling | 7.50157 |