ARC Centre of Excellence for Plant Energy Biology

MPIC — mtHSP70 Transmembrane Helix Domain Predictions

Num_PredHel indicates the number of predicted transmembrane helix domains calculated by DAS and TMHMM predictors (for methods, see MPIC paper). A tally of both predictors is shown first.

Num_PredHel Frequency
1 54

1 predicted Species DAS_Num_PredHelTMHMM_Num_PredHel
AT4G37910 Species Arabidopsis thaliana Arabidopsis thaliana
AT5G09590 Species Arabidopsis thaliana Arabidopsis thaliana
Bra002461 Species Brassica rapa Brassica rapa
Bra006027 Species Brassica rapa Brassica rapa
Bra010498 Species Brassica rapa Brassica rapa
Bra010620 Species Brassica rapa Brassica rapa
Bra011794 Species Brassica rapa Brassica rapa
Bra013786 Species Brassica rapa Brassica rapa
Bra015047 Species Brassica rapa Brassica rapa 11
Bra019231 Species Brassica rapa Brassica rapa
Bra022819 Species Brassica rapa Brassica rapa 11
Bra028521 Species Brassica rapa Brassica rapa 11
Bra028628 Species Brassica rapa Brassica rapa
Bra031657 Species Brassica rapa Brassica rapa
gi|17507981|NP_492485.1|ref Species Caenorhabditis elegans Caenorhabditis elegans
gi|17534013|NP_496509.1|ref Species Caenorhabditis elegans Caenorhabditis elegans
CML205C Species Cyanidioschyzon merolae Cyanidioschyzon merolae
CMV163C Species Cyanidioschyzon merolae Cyanidioschyzon merolae
Cre02.g080600.t1.2 Species Chlamydomonas reinhardtii Chlamydomonas reinhardtii 11
Cre06.g250100.t1.2 Species Chlamydomonas reinhardtii Chlamydomonas reinhardtii
Cre09.g393200.t1.2 Species Chlamydomonas reinhardtii Chlamydomonas reinhardtii
Carubv10000420m.g Species Capsella rubella Capsella rubella
Carubv10004245m.g Species Capsella rubella Capsella rubella
Carubv10006443m.g Species Capsella rubella Capsella rubella
Carubv10008520m.g Species Capsella rubella Capsella rubella 11
Carubv10013121m.g Species Capsella rubella Capsella rubella
Carubv10028629m.g Species Capsella rubella Capsella rubella
Cucsa.079370.1 Species Cucumis sativus Cucumis sativus
Cucsa.266110.1 Species Cucumis sativus Cucumis sativus
Cucsa.303940.1 Species Cucumis sativus Cucumis sativus 11
Cucsa.331940.1 Species Cucumis sativus Cucumis sativus
gi|66800327|ref|XP_629089.1 Species Dictyostelium discoideum Dictyostelium discoideum
gi|66800557|ref|XP_629204.1 Species Dictyostelium discoideum Dictyostelium discoideum
gi|66818991|ref|XP_643155.1 Species Dictyostelium discoideum Dictyostelium discoideum 1
gi|66822147|ref|XP_644428.1 Species Dictyostelium discoideum Dictyostelium discoideum
gi|66826525|ref|XP_646617.1 Species Dictyostelium discoideum Dictyostelium discoideum
Eucgr.E01024.1 Species Eucalyptus grandis Eucalyptus grandis 11
Eucgr.G00235.1 Species Eucalyptus grandis Eucalyptus grandis
Eucgr.G01045.1 Species Eucalyptus grandis Eucalyptus grandis
Eucgr.I02583.1 Species Eucalyptus grandis Eucalyptus grandis
Eucgr.I02771.1 Species Eucalyptus grandis Eucalyptus grandis
CBN79170.1|emb|Esi|gi|299469993 Species Ectocarpus siliculosus Ectocarpus siliculosus
Glyma05g36600.1 Species Glycine max Glycine max 11
Glyma05g36620.1 Species Glycine max Glycine max 11
Glyma07g30290.1 Species Glycine max Glycine max
Glyma08g02940.1 Species Glycine max Glycine max 11
Glyma08g02960.1 Species Glycine max Glycine max 11
Glyma08g06950.1 Species Glycine max Glycine max
Glyma13g32790.1 Species Glycine max Glycine max
Glyma15g06530.1 Species Glycine max Glycine max
Glyma16g00410.1 Species Glycine max Glycine max
gi|124256496|heat shock 70 kDa protein 1-like [Homo sapiens]|NP_005518.3|ref Species Homo sapiens Homo sapiens
gi|13676857|NP_068814.2|ref Species Homo sapiens Homo sapiens
gi|16507237|NP_005338.1|ref Species Homo sapiens Homo sapiens
gi|167466173|NP_005337.2|ref Species Homo sapiens Homo sapiens
gi|24234688|NP_004125.3|ref Species Homo sapiens Homo sapiens 1
gi|34419635|NP_002146.2|ref Species Homo sapiens Homo sapiens
gi|530381921|ref|XP_005249127.1 Species Homo sapiens Homo sapiens
gi|530398061|ref|XP_005271593.1 Species Homo sapiens Homo sapiens
gi|530427781|ref|XP_005274915.1 Species Homo sapiens Homo sapiens
gi|530427783|ref|XP_005274916.1 Species Homo sapiens Homo sapiens
gi|530428002|ref|XP_005272870.1n Species Homo sapiens Homo sapiens
gi|530428004|ref|XP_005272871.1 Species Homo sapiens Homo sapiens
gi|5729877|NP_006588.1|ref Species Homo sapiens Homo sapiens
Medtr2g005690.1 Species Medicago truncatula Medicago truncatula
Medtr2g010020.1 Species Medicago truncatula Medicago truncatula
Medtr4g092920.1 Species Medicago truncatula Medicago truncatula
gi|164426355|ref|XP_961753.2 Species Neurospora crassa Neurospora crassa
gi|85080590|ref|XP_956567.1 Species Neurospora crassa Neurospora crassa 11
gi|85110248|ref|XP_963366.1 Species Neurospora crassa Neurospora crassa
LOC_Os02g02410.1 Species Oryza sativa Oryza sativa 11
LOC_Os02g53420.1 Species Oryza sativa Oryza sativa
LOC_Os03g02260.1 Species Oryza sativa Oryza sativa
LOC_Os03g16920.1 Species Oryza sativa Oryza sativa
LOC_Os05g23740.1 Species Oryza sativa Oryza sativa
LOC_Os05g38530.1 Species Oryza sativa Oryza sativa
LOC_Os09g31486.1 Species Oryza sativa Oryza sativa
LOC_Os09g31486.2 Species Oryza sativa Oryza sativa
LOC_Os12g14070.1 Species Oryza sativa Oryza sativa
Phpat.001G091000.1 Species Physcomitrella patens Physcomitrella patens
Phpat.001G091100.1 Species Physcomitrella patens Physcomitrella patens
Phpat.002G052800.1 Species Physcomitrella patens Physcomitrella patens
Phpat.002G053100.1 Species Physcomitrella patens Physcomitrella patens
Phpat.003G101600.1 Species Physcomitrella patens Physcomitrella patens 11
Phpat.004G083500.1 Species Physcomitrella patens Physcomitrella patens
Phpat.004G105700.1 Species Physcomitrella patens Physcomitrella patens
Phpat.007G061700.1 Species Physcomitrella patens Physcomitrella patens
Phpat.007G061800.1 Species Physcomitrella patens Physcomitrella patens
Phpat.007G061900.1 Species Physcomitrella patens Physcomitrella patens
Phpat.010G067200.1 Species Physcomitrella patens Physcomitrella patens 11
Phpat.026G035400.1 Species Physcomitrella patens Physcomitrella patens
Potri.001G087500.1 Species Populus trichocarpa Populus trichocarpa 11
Potri.001G285500.1 Species Populus trichocarpa Populus trichocarpa
Potri.003G006300.1 Species Populus trichocarpa Populus trichocarpa
Potri.003G143600.1 Species Populus trichocarpa Populus trichocarpa 11
Potri.004G224400.1 Species Populus trichocarpa Populus trichocarpa
Potri.009G079700.1 Species Populus trichocarpa Populus trichocarpa
Potri.012G017600.1 Species Populus trichocarpa Populus trichocarpa 11
Potri.013G018000.1 Species Populus trichocarpa Populus trichocarpa 11
29765.m000739|29765.t000021 Species Ricinus communis Ricinus communis
29804.m001529|29804.t000060 Species Ricinus communis Ricinus communis
30068.m002531|30068.t000021 Species Ricinus communis Ricinus communis 11
YJR045C Species Saccharomyces cerevisiae Saccharomyces cerevisiae
168287 Species Selaginella moellendorffii Selaginella moellendorffii
230659 Species Selaginella moellendorffii Selaginella moellendorffii
267815 Species Selaginella moellendorffii Selaginella moellendorffii
440900 Species Selaginella moellendorffii Selaginella moellendorffii 1
PGSC0003DMG400003122|PGSC0003DMT400008099 Species Solanum tuberosum Solanum tuberosum
PGSC0003DMG400010677|PGSC0003DMT400027702 Species Solanum tuberosum Solanum tuberosum
PGSC0003DMG400012254|PGSC0003DMT400031937 Species Solanum tuberosum Solanum tuberosum 1
PGSC0003DMG400018544|PGSC0003DMT400047710 Species Solanum tuberosum Solanum tuberosum 11
PGSC0003DMG400024707|PGSC0003DMT400063543 Species Solanum tuberosum Solanum tuberosum 11
PGSC0003DMG400024887|PGSC0003DMT400064031 Species Solanum tuberosum Solanum tuberosum
PGSC0003DMG400027750|PGSC0003DMT400071337 Species Solanum tuberosum Solanum tuberosum
Vocar20003521m.g Species Volvox carteri Volvox carteri
Vocar20005243m.g Species Volvox carteri Volvox carteri
GSVIVG01006769001|GSVIVT01006769001 Species Vitis vinifera Vitis vinifera
GSVIVG01008331001|GSVIVT01008331001 Species Vitis vinifera Vitis vinifera
GSVIVG01019607001|GSVIVT01019607001 Species Vitis vinifera Vitis vinifera 11
GSVIVG01026014001|GSVIVT01026014001 Species Vitis vinifera Vitis vinifera
GSVIVG01038517001|GSVIVT01038517001 Species Vitis vinifera Vitis vinifera
AC209784.3_FG007|AC209784.3_FGT007 Species Zea mays Zea mays
GRMZM2G079668_T01 Species Zea mays Zea mays
GRMZM2G111475_T01 Species Zea mays Zea mays
GRMZM2G114793_T01 Species Zea mays Zea mays 11
GRMZM2G153815_T01 Species Zea mays Zea mays
GRMZM2G310431_T01 Species Zea mays Zea mays
GRMZM2G365374_T01 Species Zea mays Zea mays
GRMZM2G366532_T01 Species Zea mays Zea mays
GRMZM2G415007_T01 Species Zea mays Zea mays 11
GRMZM5G802801_T01 Species Zea mays Zea mays

Sequences (FASTA)