MPIC
Sequences for Brassica rapa were analysed by InterPro (Zdobnov and Apweiler 2001) using default settings.
| Database | Detected | Description | Start | End | E-Value |
|---|---|---|---|---|---|
| InterPro | IPR013126 | Heat shock protein 70 family: | |||
| PRINTS | PR00301 | 70kDa heat shock protein signature | 35 | 48 | 1.399992772E-84 |
| PRINTS | PR00301 | 70kDa heat shock protein signature | 85 | 93 | 1.399992772E-84 |
| PRINTS | PR00301 | 70kDa heat shock protein signature | 420 | 439 | 1.399992772E-84 |
| PRINTS | PR00301 | 70kDa heat shock protein signature | 63 | 75 | 1.399992772E-84 |
| PRINTS | PR00301 | 70kDa heat shock protein signature | 173 | 193 | 1.399992772E-84 |
| PRINTS | PR00301 | 70kDa heat shock protein signature | 501 | 517 | 1.399992772E-84 |
| PRINTS | PR00301 | 70kDa heat shock protein signature | 233 | 243 | 1.399992772E-84 |
| PRINTS | PR00301 | 70kDa heat shock protein signature | 361 | 377 | 1.399992772E-84 |
| PRINTS | PR00301 | 70kDa heat shock protein signature | 393 | 413 | 1.399992772E-84 |
| Pfam | PF00012 | Hsp70 protein | 36 | 643 | 1.4E-268 |
| InterPro | IPR018181 | Heat shock protein 70, conserved site: | |||
| ProSitePatterns | PS00297 | Heat shock hsp70 proteins family signature 1. | 39 | 46 | - |
| ProSitePatterns | PS00329 | Heat shock hsp70 proteins family signature 2. | 227 | 240 | - |
| ProSitePatterns | PS01036 | Heat shock hsp70 proteins family signature 3. | 364 | 378 | - |
| InterPro | IPR029047 | Heat shock protein 70kD, peptide-binding domain: | |||
| Gene3D | G3DSA:2.60.34.10 | 421 | 547 | 9.700000001E-65 | |
| SUPERFAMILY | SSF100920 | 417 | 573 | 0.0 | |
| InterPro | IPR029048 | Heat shock protein 70kD, C-terminal domain: | |||
| Gene3D | G3DSA:1.20.1270.10 | 548 | 651 | 5.4E-40 | |
| SUPERFAMILY | SSF100934 | 567 | 650 | 0.0 | |
| InterPro | No IPR | Unintegrated signatures: | |||
| Coils | Coil | 579 | 600 | - | |
| Coils | Coil | 601 | 634 | - | |
| Coils | Coil | 283 | 304 | - | |
| Gene3D | G3DSA:3.30.30.30 | 85 | 145 | 7.1E-31 | |
| Gene3D | G3DSA:3.30.420.40 | 154 | 230 | 1.7E-67 | |
| Gene3D | G3DSA:3.30.420.40 | 36 | 84 | 1.7E-67 | |
| Gene3D | G3DSA:3.30.420.40 | 346 | 388 | 2.9E-39 | |
| Gene3D | G3DSA:3.30.420.40 | 231 | 260 | 2.9E-39 | |
| Gene3D | G3DSA:3.90.640.10 | 261 | 341 | 1.3E-32 | |
| PANTHER | PTHR19375 | 34 | 653 | 0.0 | |
| Phobius | NON_CYTOPLASMIC_DOMAIN | Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. | 25 | 665 | - |
| Phobius | SIGNAL_PEPTIDE | Signal peptide region | 1 | 24 | - |
| Phobius | SIGNAL_PEPTIDE_C_REGION | C-terminal region of a signal peptide. | 19 | 24 | - |
| Phobius | SIGNAL_PEPTIDE_H_REGION | Hydrophobic region of a signal peptide. | 7 | 18 | - |
| Phobius | SIGNAL_PEPTIDE_N_REGION | N-terminal region of a signal peptide. | 1 | 6 | - |
| SUPERFAMILY | SSF53067 | 34 | 218 | 0.0 | |
| SUPERFAMILY | SSF53067 | 221 | 412 | 0.0 | |
| SignalP_EUK | SignalP-noTM | 1 | 24 | - | |
| SignalP_GRAM_NEGATIVE | SignalP-TM | 1 | 24 | - | |
| SignalP_GRAM_POSITIVE | SignalP-TM | 1 | 24 | - | |
| TMHMM | TMhelix | Region of a membrane-bound protein predicted to be embedded in the membrane. | 5 | 24 | - |
