MPIC
Sequences for Brassica rapa were analysed by InterPro (Zdobnov and Apweiler 2001) using default settings.
| Database | Detected | Description | Start | End | E-Value |
|---|---|---|---|---|---|
| InterPro | IPR013126 | Heat shock protein 70 family: | |||
| PRINTS | PR00301 | 70kDa heat shock protein signature | 394 | 414 | 3.399999724E-85 |
| PRINTS | PR00301 | 70kDa heat shock protein signature | 36 | 49 | 3.399999724E-85 |
| PRINTS | PR00301 | 70kDa heat shock protein signature | 421 | 440 | 3.399999724E-85 |
| PRINTS | PR00301 | 70kDa heat shock protein signature | 64 | 76 | 3.399999724E-85 |
| PRINTS | PR00301 | 70kDa heat shock protein signature | 502 | 518 | 3.399999724E-85 |
| PRINTS | PR00301 | 70kDa heat shock protein signature | 174 | 194 | 3.399999724E-85 |
| PRINTS | PR00301 | 70kDa heat shock protein signature | 86 | 94 | 3.399999724E-85 |
| PRINTS | PR00301 | 70kDa heat shock protein signature | 234 | 244 | 3.399999724E-85 |
| PRINTS | PR00301 | 70kDa heat shock protein signature | 362 | 378 | 3.399999724E-85 |
| Pfam | PF00012 | Hsp70 protein | 37 | 644 | 1.6E-270 |
| InterPro | IPR018181 | Heat shock protein 70, conserved site: | |||
| ProSitePatterns | PS00297 | Heat shock hsp70 proteins family signature 1. | 40 | 47 | - |
| ProSitePatterns | PS00329 | Heat shock hsp70 proteins family signature 2. | 228 | 241 | - |
| ProSitePatterns | PS01036 | Heat shock hsp70 proteins family signature 3. | 365 | 379 | - |
| InterPro | IPR029047 | Heat shock protein 70kD, peptide-binding domain: | |||
| Gene3D | G3DSA:2.60.34.10 | 422 | 548 | 5.899999999E-65 | |
| SUPERFAMILY | SSF100920 | 418 | 574 | 0.0 | |
| InterPro | IPR029048 | Heat shock protein 70kD, C-terminal domain: | |||
| Gene3D | G3DSA:1.20.1270.10 | 549 | 653 | 8.2E-41 | |
| SUPERFAMILY | SSF100934 | 568 | 651 | 0.0 | |
| InterPro | No IPR | Unintegrated signatures: | |||
| Coils | Coil | 580 | 601 | - | |
| Coils | Coil | 602 | 635 | - | |
| Coils | Coil | 284 | 305 | - | |
| Gene3D | G3DSA:3.30.30.30 | 86 | 146 | 2.3E-32 | |
| Gene3D | G3DSA:3.30.420.40 | 37 | 85 | 3.6E-69 | |
| Gene3D | G3DSA:3.30.420.40 | 155 | 231 | 3.6E-69 | |
| Gene3D | G3DSA:3.30.420.40 | 232 | 261 | 2.9E-39 | |
| Gene3D | G3DSA:3.30.420.40 | 347 | 389 | 2.9E-39 | |
| Gene3D | G3DSA:3.90.640.10 | 262 | 342 | 2.0E-32 | |
| PANTHER | PTHR19375 | 35 | 664 | 0.0 | |
| Phobius | NON_CYTOPLASMIC_DOMAIN | Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. | 28 | 666 | - |
| Phobius | SIGNAL_PEPTIDE | Signal peptide region | 1 | 27 | - |
| Phobius | SIGNAL_PEPTIDE_C_REGION | C-terminal region of a signal peptide. | 23 | 27 | - |
| Phobius | SIGNAL_PEPTIDE_H_REGION | Hydrophobic region of a signal peptide. | 11 | 22 | - |
| Phobius | SIGNAL_PEPTIDE_N_REGION | N-terminal region of a signal peptide. | 1 | 10 | - |
| ProSiteProfiles | PS51257 | Prokaryotic membrane lipoprotein lipid attachment site profile. | 1 | 20 | 0.0 |
| SUPERFAMILY | SSF53067 | 222 | 413 | 0.0 | |
| SUPERFAMILY | SSF53067 | 35 | 219 | 0.0 | |
| SignalP_EUK | SignalP-noTM | 1 | 27 | - | |
| TMHMM | TMhelix | Region of a membrane-bound protein predicted to be embedded in the membrane. | 5 | 27 | - |
