ARC Centre of Excellence for Plant Energy Biology

MPIC — mtHSP60 Transmembrane Helix Domain Predictions

Num_PredHel indicates the number of predicted transmembrane helix domains calculated by DAS and TMHMM predictors (for methods, see MPIC paper). A tally of both predictors is shown first.


MPIC Gene Locus Species DAS_Num_PredHelTMHMM_Num_PredHel
AT2G33210 Species Arabidopsis thaliana Arabidopsis thaliana
AT3G13860 Species Arabidopsis thaliana Arabidopsis thaliana
AT3G23990 Species Arabidopsis thaliana Arabidopsis thaliana
Bra001524 Species Brassica rapa Brassica rapa
Bra001934 Species Brassica rapa Brassica rapa
Bra005514 Species Brassica rapa Brassica rapa
Bra021836 Species Brassica rapa Brassica rapa
Bra022931 Species Brassica rapa Brassica rapa
gi|17555558|NP_497429.1|ref Species Caenorhabditis elegans Caenorhabditis elegans
CMB021CT Species Cyanidioschyzon merolae Cyanidioschyzon merolae
CMQ270CT Species Cyanidioschyzon merolae Cyanidioschyzon merolae
CMV086CT Species Cyanidioschyzon merolae Cyanidioschyzon merolae
Cre06.g309100.t1.2 Species Chlamydomonas reinhardtii Chlamydomonas reinhardtii
Carubv10013241m.g Species Capsella rubella Capsella rubella
Carubv10013333m.g Species Capsella rubella Capsella rubella
Carubv10022887m.g Species Capsella rubella Capsella rubella
Cucsa.078710.1 Species Cucumis sativus Cucumis sativus
Cucsa.360540.1 Species Cucumis sativus Cucumis sativus
Cucsa.383180.1 Species Cucumis sativus Cucumis sativus
gi|66806233 Species Dictyostelium discoideum Dictyostelium discoideum
Eucgr.F03134.1 Species Eucalyptus grandis Eucalyptus grandis
Eucgr.H02866.1 Species Eucalyptus grandis Eucalyptus grandis
Esi0161_0060 Species Ectocarpus siliculosus Ectocarpus siliculosus
Glyma07g01190.1 Species Glycine max Glycine max
Glyma08g20560.1 Species Glycine max Glycine max
Glyma08g20560.2 Species Glycine max Glycine max
Glyma10g25630.1 Species Glycine max Glycine max
Glyma10g33680.1 Species Glycine max Glycine max
Glyma20g19980.1 Species Glycine max Glycine max
Glyma20g33910.1 Species Glycine max Glycine max
gi|31542947 Species Homo sapiens Homo sapiens
Medtr1g090130.1 Species Medicago truncatula Medicago truncatula
Medtr1g090140.1 Species Medicago truncatula Medicago truncatula
Medtr8g017080.1 Species Medicago truncatula Medicago truncatula
gi|164428039 Species Neurospora crassa Neurospora crassa
LOC_Os03g04970.1 Species Oryza sativa Oryza sativa
LOC_Os05g46290.1 Species Oryza sativa Oryza sativa
LOC_Os10g32550.1 Species Oryza sativa Oryza sativa
Phpat.004G086700.1 Species Physcomitrella patens Physcomitrella patens
Phpat.013G023400.1 Species Physcomitrella patens Physcomitrella patens
Phpat.020G069000.1 Species Physcomitrella patens Physcomitrella patens
Phpat.026G009800.1 Species Physcomitrella patens Physcomitrella patens
Potri.001G054400.1 Species Populus trichocarpa Populus trichocarpa
Potri.002G252900.1 Species Populus trichocarpa Populus trichocarpa
Potri.003G037400.1 Species Populus trichocarpa Populus trichocarpa
Potri.003G039600.1 Species Populus trichocarpa Populus trichocarpa
Potri.003G173900.1 Species Populus trichocarpa Populus trichocarpa
28694.m000667|28694.t000010 Species Ricinus communis Ricinus communis
29904.m003020|29904.t000134 Species Ricinus communis Ricinus communis
30204.m001817|30204.t000086 Species Ricinus communis Ricinus communis
YLR259C Species Saccharomyces cerevisiae Saccharomyces cerevisiae
405358 Species Selaginella moellendorffii Selaginella moellendorffii
74977 Species Selaginella moellendorffii Selaginella moellendorffii
85251 Species Selaginella moellendorffii Selaginella moellendorffii
PGSC0003DMG400002585|PGSC0003DMT400006642 Species Solanum tuberosum Solanum tuberosum
PGSC0003DMG400011575|PGSC0003DMT400030265 Species Solanum tuberosum Solanum tuberosum
PGSC0003DMG401027165|PGSC0003DMT400069855 Species Solanum tuberosum Solanum tuberosum
Vocar20007800m.g Species Volvox carteri Volvox carteri
GSVIVG01016859001|GSVIVT01016859001 Species Vitis vinifera Vitis vinifera
GSVIVG01029025001|GSVIVT01029025001 Species Vitis vinifera Vitis vinifera
GRMZM2G074790_T01 Species Zea mays Zea mays
GRMZM2G416120_T01 Species Zea mays Zea mays
GRMZM2G458208_T01 Species Zea mays Zea mays

Sequences (FASTA)