MPIC
Sequences for Populus trichocarpa were analysed by InterPro (Zdobnov and Apweiler 2001) using default settings.
| Database | Detected | Description | Start | End | E-Value |
|---|---|---|---|---|---|
| InterPro | IPR001844 | Chaperonin Cpn60: | |||
| Hamap | MF_00600 | 60 kDa chaperonin [groL]. | 33 | 572 | 37.802 |
| PRINTS | PR00298 | 60kDa chaperonin signature | 114 | 141 | 7.495203E-71 |
| PRINTS | PR00298 | 60kDa chaperonin signature | 58 | 84 | 7.495203E-71 |
| PRINTS | PR00298 | 60kDa chaperonin signature | 381 | 406 | 7.495203E-71 |
| PRINTS | PR00298 | 60kDa chaperonin signature | 429 | 450 | 7.495203E-71 |
| PRINTS | PR00298 | 60kDa chaperonin signature | 299 | 322 | 7.495203E-71 |
| TIGRFAM | TIGR02348 | GroEL: chaperonin GroL | 34 | 558 | 2.7E-229 |
| InterPro | IPR002423 | Chaperonin Cpn60/TCP-1: | |||
| PANTHER | PTHR11353 | 20 | 572 | 1.1E-292 | |
| Pfam | PF00118 | TCP-1/cpn60 chaperonin family | 54 | 555 | 5.5E-119 |
| SUPERFAMILY | SSF48592 | 437 | 553 | 2.9E-74 | |
| SUPERFAMILY | SSF48592 | 38 | 165 | 2.9E-74 | |
| InterPro | IPR018370 | Chaperonin Cpn60, conserved site: | |||
| ProSitePatterns | PS00296 | Chaperonins cpn60 signature. | 436 | 447 | - |
| InterPro | IPR027409 | GroEL-like apical domain: | |||
| Gene3D | G3DSA:3.50.7.10 | 228 | 400 | 6.7E-88 | |
| SUPERFAMILY | SSF52029 | 216 | 407 | 3.14E-79 | |
| InterPro | IPR027413 | GroEL-like equatorial domain: | |||
| Gene3D | G3DSA:1.10.560.10 | 401 | 550 | 7.6E-45 | |
| Gene3D | G3DSA:1.10.560.10 | 34 | 227 | 6.2E-42 | |
| InterPro | No IPR | Unintegrated signatures: | |||
| SUPERFAMILY | SSF54849 | 169 | 236 | 6.87E-23 | |
