MPIC
Sequences for Populus trichocarpa were analysed by InterPro (Zdobnov and Apweiler 2001) using default settings.
| Database | Detected | Description | Start | End | E-Value |
|---|---|---|---|---|---|
| InterPro | IPR001844 | Chaperonin Cpn60: | |||
| PRINTS | PR00298 | 60kDa chaperonin signature | 233 | 256 | 3.013986E-40 |
| PRINTS | PR00298 | 60kDa chaperonin signature | 49 | 76 | 3.013986E-40 |
| PRINTS | PR00298 | 60kDa chaperonin signature | 314 | 339 | 3.013986E-40 |
| PRINTS | PR00298 | 60kDa chaperonin signature | 362 | 383 | 3.013986E-40 |
| InterPro | IPR002423 | Chaperonin Cpn60/TCP-1: | |||
| PANTHER | PTHR11353 | 1 | 447 | 3.9E-186 | |
| Pfam | PF00118 | TCP-1/cpn60 chaperonin family | 1 | 446 | 1.1E-85 |
| SUPERFAMILY | SSF48592 | 370 | 446 | 3.74E-41 | |
| SUPERFAMILY | SSF48592 | 1 | 100 | 3.74E-41 | |
| InterPro | IPR018370 | Chaperonin Cpn60, conserved site: | |||
| ProSitePatterns | PS00296 | Chaperonins cpn60 signature. | 369 | 380 | - |
| InterPro | IPR027409 | GroEL-like apical domain: | |||
| Gene3D | G3DSA:3.50.7.10 | 163 | 331 | 1.3E-71 | |
| SUPERFAMILY | SSF52029 | 150 | 340 | 1.05E-63 | |
| InterPro | IPR027413 | GroEL-like equatorial domain: | |||
| Gene3D | G3DSA:1.10.560.10 | 332 | 447 | 6.6E-22 | |
| Gene3D | G3DSA:1.10.560.10 | 1 | 162 | 6.6E-26 | |
| InterPro | No IPR | Unintegrated signatures: | |||
| Coils | Coil | 390 | 411 | - | |
| PANTHER | PTHR11353:SF75 | 1 | 447 | 3.9E-186 | |
| SUPERFAMILY | SSF54849 | 104 | 170 | 9.39E-23 | |
