MPIC
Sequences for Physcomitrella patens were analysed by InterPro (Zdobnov and Apweiler 2001) using default settings.
| Database | Detected | Description | Start | End | E-Value |
|---|---|---|---|---|---|
| InterPro | IPR001844 | Chaperonin Cpn60: | |||
| Hamap | MF_00600 | 60 kDa chaperonin [groL]. | 17 | 562 | 38.127 |
| PRINTS | PR00298 | 60kDa chaperonin signature | 42 | 68 | 3.741239E-71 |
| PRINTS | PR00298 | 60kDa chaperonin signature | 281 | 304 | 3.741239E-71 |
| PRINTS | PR00298 | 60kDa chaperonin signature | 98 | 125 | 3.741239E-71 |
| PRINTS | PR00298 | 60kDa chaperonin signature | 363 | 388 | 3.741239E-71 |
| PRINTS | PR00298 | 60kDa chaperonin signature | 411 | 432 | 3.741239E-71 |
| TIGRFAM | TIGR02348 | GroEL: chaperonin GroL | 18 | 540 | 1.8E-228 |
| InterPro | IPR002423 | Chaperonin Cpn60/TCP-1: | |||
| PANTHER | PTHR11353 | 1 | 563 | 8.4E-291 | |
| Pfam | PF00118 | TCP-1/cpn60 chaperonin family | 38 | 537 | 6.0E-117 |
| SUPERFAMILY | SSF48592 | 22 | 149 | 7.41E-75 | |
| SUPERFAMILY | SSF48592 | 419 | 535 | 7.41E-75 | |
| InterPro | IPR018370 | Chaperonin Cpn60, conserved site: | |||
| ProSitePatterns | PS00296 | Chaperonins cpn60 signature. | 418 | 429 | - |
| InterPro | IPR027409 | GroEL-like apical domain: | |||
| Gene3D | G3DSA:3.50.7.10 | 204 | 379 | 3.3E-91 | |
| SUPERFAMILY | SSF52029 | 200 | 389 | 7.53E-78 | |
| InterPro | IPR027413 | GroEL-like equatorial domain: | |||
| Gene3D | G3DSA:1.10.560.10 | 380 | 532 | 1.4E-45 | |
| Gene3D | G3DSA:1.10.560.10 | 18 | 203 | 1.8E-42 | |
| InterPro | No IPR | Unintegrated signatures: | |||
| Phobius | NON_CYTOPLASMIC_DOMAIN | Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. | 19 | 564 | - |
| Phobius | SIGNAL_PEPTIDE | Signal peptide region | 1 | 18 | - |
| Phobius | SIGNAL_PEPTIDE_C_REGION | C-terminal region of a signal peptide. | 14 | 18 | - |
| Phobius | SIGNAL_PEPTIDE_H_REGION | Hydrophobic region of a signal peptide. | 4 | 13 | - |
| Phobius | SIGNAL_PEPTIDE_N_REGION | N-terminal region of a signal peptide. | 1 | 3 | - |
| SUPERFAMILY | SSF54849 | 153 | 222 | 4.58E-23 | |
