ARC Centre of Excellence for Plant Energy Biology

MPIC — mtHSP60 – PGSC0003DMG400002585 InterPro Results

Sequences for Solanum tuberosum were analysed by InterPro (Zdobnov and Apweiler 2001) using default settings.

Database Detected Description Start End E-Value
InterPro IPR001844 Chaperonin Cpn60:
PRINTS PR00298 60kDa chaperonin signature 253 276 3.399999724E-66
PRINTS PR00298 60kDa chaperonin signature 335 360 3.399999724E-66
PRINTS PR00298 60kDa chaperonin signature 12 38 3.399999724E-66
PRINTS PR00298 60kDa chaperonin signature 383 404 3.399999724E-66
PRINTS PR00298 60kDa chaperonin signature 68 95 3.399999724E-66
TIGRFAM TIGR02348 GroEL: chaperonin GroL 1 510 6.8E-206
InterPro IPR002423 Chaperonin Cpn60/TCP-1:
PANTHER PTHR11353 1 510 0.0
Pfam PF00118 TCP-1/cpn60 chaperonin family 8 510 2.1E-111
SUPERFAMILY SSF48592 1 123 0.0
SUPERFAMILY SSF48592 394 507 0.0
InterPro IPR018370 Chaperonin Cpn60, conserved site:
ProSitePatterns PS00296 Chaperonins cpn60 signature. 390 401 -
InterPro IPR027409 GroEL-like apical domain:
Gene3D G3DSA:3.50.7.10 174 352 3.3E-84
SUPERFAMILY SSF52029 170 361 0.0
InterPro IPR027413 GroEL-like equatorial domain:
Gene3D G3DSA:1.10.560.10 353 504 1.5E-38
Gene3D G3DSA:1.10.560.10 1 173 1.3E-36
InterPro No IPR Unintegrated signatures:
SUPERFAMILY SSF54849 346 394 0.0
SUPERFAMILY SSF54849 123 190 0.0

InterPro
Clickable SVG
Courtesy of EMBL-EBI

Sequences (FASTA)