ARC Centre of Excellence for Plant Energy Biology

MPIC — mtHSP60 – Carubv10013333m.g InterPro Results

Sequences for Capsella rubella were analysed by InterPro (Zdobnov and Apweiler 2001) using default settings.

Database	Detected	Description	Start	End	E-Value
InterPro	IPR001844	Chaperonin Cpn60:
Hamap	MF_00600	60 kDa chaperonin [groL].	32	572	0.0
PRINTS	PR00298	60kDa chaperonin signature	428	449	3.499994669E-67
PRINTS	PR00298	60kDa chaperonin signature	113	140	3.499994669E-67
PRINTS	PR00298	60kDa chaperonin signature	298	321	3.499994669E-67
PRINTS	PR00298	60kDa chaperonin signature	57	83	3.499994669E-67
PRINTS	PR00298	60kDa chaperonin signature	380	405	3.499994669E-67
TIGRFAM	TIGR02348	GroEL: chaperonin GroL	33	553	5.1E-214
InterPro	IPR002423	Chaperonin Cpn60/TCP-1:
PANTHER	PTHR11353		18	552	0.0
Pfam	PF00118	TCP-1/cpn60 chaperonin family	53	551	2.5E-117
SUPERFAMILY	SSF48592		436	550	0.0
SUPERFAMILY	SSF48592		37	164	0.0
InterPro	IPR018370	Chaperonin Cpn60, conserved site:
ProSitePatterns	PS00296	Chaperonins cpn60 signature.	435	446	-
InterPro	IPR027409	GroEL-like apical domain:
Gene3D	G3DSA:3.50.7.10		227	397	1.6E-81
SUPERFAMILY	SSF52029		214	406	0.0
InterPro	IPR027413	GroEL-like equatorial domain:
Gene3D	G3DSA:1.10.560.10		33	226	7.5E-41
Gene3D	G3DSA:1.10.560.10		398	549	1.3E-42
InterPro	No IPR	Unintegrated signatures:
Coils	Coil		456	477	-
SUPERFAMILY	SSF54849		168	235	0.0

Clickable SVG
Courtesy of EMBL-EBI

Sequences (FASTA)