MPIC
Sequences for Brassica rapa were analysed by InterPro (Zdobnov and Apweiler 2001) using default settings.
| Database | Detected | Description | Start | End | E-Value |
|---|---|---|---|---|---|
| InterPro | IPR002423 | Chaperonin Cpn60/TCP-1: | |||
| PANTHER | PTHR11353 | 11 | 434 | 0.0 | |
| Pfam | PF00118 | TCP-1/cpn60 chaperonin family | 20 | 250 | 4.8E-32 |
| Pfam | PF00118 | TCP-1/cpn60 chaperonin family | 261 | 434 | 4.1E-39 |
| SUPERFAMILY | SSF48592 | 14 | 148 | 0.0 | |
| SUPERFAMILY | SSF48592 | 331 | 434 | 0.0 | |
| InterPro | IPR017998 | Chaperone tailless complex polypeptide 1 (TCP-1): | |||
| PRINTS | PR00304 | Tailless complex polypeptide 1 (chaperone) signature | 88 | 107 | 2.19999901E-9 |
| PRINTS | PR00304 | Tailless complex polypeptide 1 (chaperone) signature | 22 | 38 | 2.19999901E-9 |
| InterPro | IPR027409 | GroEL-like apical domain: | |||
| Gene3D | G3DSA:3.50.7.10 | 256 | 333 | 5.5E-11 | |
| Gene3D | G3DSA:3.50.7.10 | 211 | 255 | 4.8E-16 | |
| SUPERFAMILY | SSF52029 | 199 | 315 | 0.0 | |
| InterPro | IPR027410 | TCP-1-like chaperonin intermediate domain: | |||
| Gene3D | G3DSA:3.30.260.10 | 152 | 210 | 4.9E-31 | |
| InterPro | IPR027413 | GroEL-like equatorial domain: | |||
| Gene3D | G3DSA:1.10.560.10 | 334 | 434 | 2.9E-43 | |
| Gene3D | G3DSA:1.10.560.10 | 15 | 149 | 2.9E-43 | |
| InterPro | No IPR | Unintegrated signatures: | |||
| PANTHER | PTHR11353:SF75 | 11 | 434 | 0.0 | |
| SUPERFAMILY | SSF54849 | 152 | 214 | 0.0 | |
