ARC Centre of Excellence for Plant Energy Biology

MPIC — mtHSP10 Transmembrane Helix Domain Predictions

Num_PredHel indicates the number of predicted transmembrane helix domains calculated by DAS and TMHMM predictors (for methods, see MPIC paper). A tally of both predictors is shown first.

Num_PredHel Frequency
1 2

1 predicted Species DAS_Num_PredHelTMHMM_Num_PredHel
AT1G14980 Species Arabidopsis thaliana Arabidopsis thaliana
AT1G23100 Species Arabidopsis thaliana Arabidopsis thaliana
Bra016677 Species Brassica rapa Brassica rapa
Bra024563 Species Brassica rapa Brassica rapa
Bra026173 Species Brassica rapa Brassica rapa
Bra026789 Species Brassica rapa Brassica rapa
gi|17555568|NP_497428.1|ref Species Caenorhabditis elegans Caenorhabditis elegans
CMF129CT Species Cyanidioschyzon merolae Cyanidioschyzon merolae
g3695.t1 Species Chlamydomonas reinhardtii Chlamydomonas reinhardtii
Carubv10010732m.g Species Capsella rubella Capsella rubella
Carubv10010739m.g Species Capsella rubella Capsella rubella
Cucsa.280360.1 Species Cucumis sativus Cucumis sativus
Cucsa.358500.1 Species Cucumis sativus Cucumis sativus
gi|66806193|ref|XP_636819.1 Species Dictyostelium discoideum Dictyostelium discoideum
gi|66806699|ref|XP_637072.1 Species Dictyostelium discoideum Dictyostelium discoideum
Eucgr.B02909.1 Species Eucalyptus grandis Eucalyptus grandis
Eucgr.B03754.1 Species Eucalyptus grandis Eucalyptus grandis
Esi0000_0403 Species Ectocarpus siliculosus Ectocarpus siliculosus
Glyma03g28120.1 Species Glycine max Glycine max
Glyma06g41830.1 Species Glycine max Glycine max
Glyma07g34380.1 Species Glycine max Glycine max
Glyma19g30860.1 Species Glycine max Glycine max
Glyma20g02110.1 Species Glycine max Glycine max 11
gi|4504523|NP_002148.1|ref Species Homo sapiens Homo sapiens
Medtr3g077350.1 Species Medicago truncatula Medicago truncatula
Medtr7g089300.1 Species Medicago truncatula Medicago truncatula
gi|85079266|ref|XP_956315.1 Species Neurospora crassa Neurospora crassa
LOC_Os03g25050.1 Species Oryza sativa Oryza sativa
LOC_Os07g44740.1 Species Oryza sativa Oryza sativa
Phpat.004G011000.1 Species Physcomitrella patens Physcomitrella patens
Phpat.008G026900.1 Species Physcomitrella patens Physcomitrella patens
Phpat.008G027000.1 Species Physcomitrella patens Physcomitrella patens
Phpat.012G089700.1 Species Physcomitrella patens Physcomitrella patens
Potri.001G274300.1 Species Populus trichocarpa Populus trichocarpa
Potri.008G130500.1 Species Populus trichocarpa Populus trichocarpa
Potri.009G068900.1 Species Populus trichocarpa Populus trichocarpa
Potri.010G111600.1 Species Populus trichocarpa Populus trichocarpa
29816.m000688|29816.t000025 Species Ricinus communis Ricinus communis
YOR020C Species Saccharomyces cerevisiae Saccharomyces cerevisiae
D8RAQ5_SELML|tr Species Selaginella moellendorffii Selaginella moellendorffii
PGSC0003DMG400028744|PGSC0003DMT400073969 Species Solanum tuberosum Solanum tuberosum
PGSC0003DMG402023448|PGSC0003DMT400060280 Species Solanum tuberosum Solanum tuberosum
D8TRX1_VOLCA|tr Species Volvox carteri Volvox carteri
GSVIVG01011742001|GSVIVT01011742001 Species Vitis vinifera Vitis vinifera
GSVIVG01025759001|GSVIVT01025759001 Species Vitis vinifera Vitis vinifera
GSVIVG01037354001|GSVIVT01037354001 Species Vitis vinifera Vitis vinifera
AC225518_12.1 Mt Species Zea mays Zea mays
GRMZM2G013652_T01 Species Zea mays Zea mays
GRMZM2G035063_T01 Species Zea mays Zea mays
GRMZM2G073401_T01 Species Zea mays Zea mays
GRMZM2G410812_T01 Species Zea mays Zea mays

Sequences (FASTA)