ARC Centre of Excellence for Plant Energy Biology

MPIC — mtHSP10 Targeting Predictions

Computational targeting prediction programs were run en bloc for all included species using each algorithm’s default parameters applicable per species kingdom (Boden and Hawkins 2005; Claros 1995; Emanuelsson et al. 2000; Emanuelsson et al. 1999; Neuberger et al. 2003; Small et al. 2004).

Prediction Frequency
mTP 137
cTP 3
ER 3
SP 1

Abbreviations

cTP: chloroplast targeting peptide (plants only)
ER: endoplasmic reticulum
mTP: mitochrondrial targeting peptide
SP: signal peptide / secretory pathway

mTP predicted plus 3 others Species ChloroPMitoProt2PProwlerPredotarPTS1TargetP
AT1G14980 Species Arabidopsis thaliana Arabidopsis thaliana mTPmTPmTPmTP
AT1G23100 Species Arabidopsis thaliana Arabidopsis thaliana mTPmTPmTPmTP
Bra016677 Species Brassica rapa Brassica rapa mTPmTPmTPmTP
Bra024563 Species Brassica rapa Brassica rapa mTPmTPmTPmTP
Bra026173 Species Brassica rapa Brassica rapa mTPmTPmTPmTP
Bra026789 Species Brassica rapa Brassica rapa mTPmTPmTPmTP
gi|17555568|NP_497428.1|ref Species Caenorhabditis elegans Caenorhabditis elegans mTP
CMF129CT Species Cyanidioschyzon merolae Cyanidioschyzon merolae mTPcTPER
g3695.t1 Species Chlamydomonas reinhardtii Chlamydomonas reinhardtii mTP
Carubv10010732m.g Species Capsella rubella Capsella rubella mTPmTPmTPmTP
Carubv10010739m.g Species Capsella rubella Capsella rubella mTPmTPmTPmTP
Cucsa.280360.1 Species Cucumis sativus Cucumis sativus mTPmTPmTPmTP
Cucsa.358500.1 Species Cucumis sativus Cucumis sativus mTPmTPmTPmTP
gi|66806193|ref|XP_636819.1 Species Dictyostelium discoideum Dictyostelium discoideum mTP
gi|66806699|ref|XP_637072.1 Species Dictyostelium discoideum Dictyostelium discoideum mTP
Eucgr.B02909.1 Species Eucalyptus grandis Eucalyptus grandis mTPmTPmTPmTP
Eucgr.B03754.1 Species Eucalyptus grandis Eucalyptus grandis mTPmTP
Esi0000_0403 Species Ectocarpus siliculosus Ectocarpus siliculosus mTP
Glyma03g28120.1 Species Glycine max Glycine max mTPmTPmTP
Glyma06g41830.1 Species Glycine max Glycine max
Glyma07g34380.1 Species Glycine max Glycine max mTPmTPmTP
Glyma19g30860.1 Species Glycine max Glycine max mTPmTPmTP
Glyma20g02110.1 Species Glycine max Glycine max mTPSPmTP
gi|4504523|NP_002148.1|ref Species Homo sapiens Homo sapiens mTP
Medtr3g077350.1 Species Medicago truncatula Medicago truncatula mTPcTP
Medtr7g089300.1 Species Medicago truncatula Medicago truncatula mTPmTPmTPmTP
gi|85079266|ref|XP_956315.1 Species Neurospora crassa Neurospora crassa mTP
LOC_Os03g25050.1 Species Oryza sativa Oryza sativa mTPmTPmTPmTP
LOC_Os07g44740.1 Species Oryza sativa Oryza sativa mTPmTPmTPmTP
Phpat.004G011000.1 Species Physcomitrella patens Physcomitrella patens mTPmTPmTPmTP
Phpat.008G026900.1 Species Physcomitrella patens Physcomitrella patens mTPERmTP
Phpat.008G027000.1 Species Physcomitrella patens Physcomitrella patens
Phpat.012G089700.1 Species Physcomitrella patens Physcomitrella patens mTPmTPERmTP
Potri.001G274300.1 Species Populus trichocarpa Populus trichocarpa mTPmTP
Potri.008G130500.1 Species Populus trichocarpa Populus trichocarpa mTPmTPmTPmTP
Potri.009G068900.1 Species Populus trichocarpa Populus trichocarpa mTPmTP
Potri.010G111600.1 Species Populus trichocarpa Populus trichocarpa mTPmTPmTPmTP
29816.m000688|29816.t000025 Species Ricinus communis Ricinus communis mTPmTPmTPmTP
YOR020C Species Saccharomyces cerevisiae Saccharomyces cerevisiae mTPcTPmTP
D8RAQ5_SELML|tr Species Selaginella moellendorffii Selaginella moellendorffii
PGSC0003DMG400028744|PGSC0003DMT400073969 Species Solanum tuberosum Solanum tuberosum mTPmTPmTP
PGSC0003DMG402023448|PGSC0003DMT400060280 Species Solanum tuberosum Solanum tuberosum mTPmTPmTP
D8TRX1_VOLCA|tr Species Volvox carteri Volvox carteri mTP
GSVIVG01011742001|GSVIVT01011742001 Species Vitis vinifera Vitis vinifera mTPmTPmTP
GSVIVG01025759001|GSVIVT01025759001 Species Vitis vinifera Vitis vinifera mTPmTPmTP
GSVIVG01037354001|GSVIVT01037354001 Species Vitis vinifera Vitis vinifera mTPmTP
AC225518_12.1 Mt Species Zea mays Zea mays mTP
GRMZM2G013652_T01 Species Zea mays Zea mays mTPmTPmTPmTP
GRMZM2G035063_T01 Species Zea mays Zea mays mTPmTPmTPmTP
GRMZM2G073401_T01 Species Zea mays Zea mays mTPmTPmTPmTP
GRMZM2G410812_T01 Species Zea mays Zea mays mTPmTPmTPmTP

Sequences (FASTA)