ARC Centre of Excellence for Plant Energy Biology

MPIC — ZIM17,TIM15 Transmembrane Helix Domain Predictions

Num_PredHel indicates the number of predicted transmembrane helix domains calculated by DAS and TMHMM predictors (for methods, see MPIC paper). A tally of both predictors is shown first.

Num_PredHel Frequency
1 1
4 1
6 1

6 predicted Species DAS_Num_PredHelTMHMM_Num_PredHel
AT1G68730 Species Arabidopsis thaliana Arabidopsis thaliana
AT3G54826 Species Arabidopsis thaliana Arabidopsis thaliana
AT5G27280 Species Arabidopsis thaliana Arabidopsis thaliana
Bra003197 Species Brassica rapa Brassica rapa
Bra007101 Species Brassica rapa Brassica rapa
Q9TXQ4_CAEEL|tr Species Caenorhabditis elegans Caenorhabditis elegans
CMT595C Species Cyanidioschyzon merolae Cyanidioschyzon merolae
Cre07.g334850.t1.2 Species Chlamydomonas reinhardtii Chlamydomonas reinhardtii 1
Carubv10018399m.g Species Capsella rubella Capsella rubella
Cucsa.284080|Cucsa.284090.2 Species Cucumis sativus Cucumis sativus
Cucsa.308490.1 Species Cucumis sativus Cucumis sativus
gi|66800951 Species Dictyostelium discoideum Dictyostelium discoideum
Eucgr.G02856.1 Species Eucalyptus grandis Eucalyptus grandis
Esi0238_0026 Species Ectocarpus siliculosus Ectocarpus siliculosus
Glyma01g23015.1 Species Glycine max Glycine max
Glyma02g14430.1 Species Glycine max Glycine max
Glyma10g35330.1 Species Glycine max Glycine max
Glyma20g32180.1 Species Glycine max Glycine max
gi|124249392 Species Homo sapiens Homo sapiens
Medtr1g094720.1 Species Medicago truncatula Medicago truncatula
gi|85116624 Species Neurospora crassa Neurospora crassa
LOC_Os02g57430.1 Species Oryza sativa Oryza sativa
Phpat.005G013800.1 Species Physcomitrella patens Physcomitrella patens
Phpat.010G079800.1 Species Physcomitrella patens Physcomitrella patens
Phpat.021G072000.1 Species Physcomitrella patens Physcomitrella patens
Potri.008G037300.1 Species Populus trichocarpa Populus trichocarpa
Potri.010G132400.1 Species Populus trichocarpa Populus trichocarpa
29595.m000284|29595.t000008 Species Ricinus communis Ricinus communis
YNL310C Species Saccharomyces cerevisiae Saccharomyces cerevisiae
58719 Species Selaginella moellendorffii Selaginella moellendorffii
9162 Species Selaginella moellendorffii Selaginella moellendorffii
PGSC0003DMG400025127|PGSC0003DMT400064691 Species Solanum tuberosum Solanum tuberosum 64
PGSC0003DMG400027152|PGSC0003DMT400069831 Species Solanum tuberosum Solanum tuberosum
D8TZD5_VOLCA|tr Species Volvox carteri Volvox carteri
GSVIVG01016242001|GSVIVT01016242001 Species Vitis vinifera Vitis vinifera
GRMZM2G064608_T01 Species Zea mays Zea mays

Sequences (FASTA)