ARC Centre of Excellence for Plant Energy Biology

MPIC — ZIM17,TIM15 Athena Promoter Motif Predictions

Putative and known regulatory elements within upstream regions of each gene were obtained from, and enable analysis of co-regulated genes sourced from, Athena: Arabidopsis thaliana a resource for rapid visualization and systematic analysis of Arabidopsis promoter sequences (O’Connor et al. 2005).

Locus Species Motif Pattern Start End Sense Sequence
At5g27280 Species Arabidopsis thaliana Arabidopsis thaliana ARF binding site motifTGTCTC-840-835+TGTCTC
At5g27280 Species Arabidopsis thaliana Arabidopsis thaliana CARGCW8GATCWWWWWWWWG-525-516+CATATATATG
At5g27280 Species Arabidopsis thaliana Arabidopsis thaliana CARGCW8GATCWWWWWWWWG-525-516-CATATATATG
At5g27280 Species Arabidopsis thaliana Arabidopsis thaliana GAREATTAACAAR-606-600-TTTGTTA
At5g27280 Species Arabidopsis thaliana Arabidopsis thaliana Ibox promoter motifGATAAG-749-744+GATAAG
At5g27280 Species Arabidopsis thaliana Arabidopsis thaliana MYB binding site promoterMACCWAMC-224-217+AACCTACC
At5g27280 Species Arabidopsis thaliana Arabidopsis thaliana MYB1ATWAACCA-398-393+AAACCA
At5g27280 Species Arabidopsis thaliana Arabidopsis thaliana MYB4 binding site motifAMCWAMC-223-217+ACCTACC
At5g27280 Species Arabidopsis thaliana Arabidopsis thaliana MYB4 binding site motifAMCWAMC-274-268-GGTTGTT
At5g27280 Species Arabidopsis thaliana Arabidopsis thaliana MYB4 binding site motifAMCWAMC-686-680-GGTAGTT
At5g27280 Species Arabidopsis thaliana Arabidopsis thaliana SV40 core promoter motifGTGGWWHG-281-274+GTGGAAAG
At5g27280 Species Arabidopsis thaliana Arabidopsis thaliana TATA-box MotifTATAAA-494-489+TATAAA
At5g27280 Species Arabidopsis thaliana Arabidopsis thaliana TATA-box MotifTATAAA-55-50-TTTATA
At5g27280 Species Arabidopsis thaliana Arabidopsis thaliana W-box promoter motifTTGACY-464-459+TTGACC

Sequences (FASTA)