ARC Centre of Excellence for Plant Energy Biology

MPIC — UNKNOWN-PRAT-5 Athena Promoter Motif Predictions

Putative and known regulatory elements within upstream regions of each gene were obtained from, and enable analysis of co-regulated genes sourced from, Athena: Arabidopsis thaliana a resource for rapid visualization and systematic analysis of Arabidopsis promoter sequences (O’Connor et al. 2005).

Locus	Species	Motif	Pattern	Start	End	Sense	Sequence
At3g25120	Arabidopsis thaliana	ARF binding site motif	TGTCTC	-738	-733	+	TGTCTC
At3g25120	Arabidopsis thaliana	AtMYB2 BS in RD22	CTAACCA	-562	-556	-	TGGTTAG
At3g25120	Arabidopsis thaliana	AtMYB2 BS in RD22	CTAACCA	-927	-921	+	CTAACCA
At3g25120	Arabidopsis thaliana	CARGCW8GAT	CWWWWWWWWG	-421	-412	+	CATAATTTTG
At3g25120	Arabidopsis thaliana	CARGCW8GAT	CWWWWWWWWG	-421	-412	-	CATAATTTTG
At3g25120	Arabidopsis thaliana	CARGCW8GAT	CWWWWWWWWG	-84	-75	+	CTTAATTATG
At3g25120	Arabidopsis thaliana	CARGCW8GAT	CWWWWWWWWG	-84	-75	-	CTTAATTATG
At3g25120	Arabidopsis thaliana	Ibox promoter motif	GATAAG	-874	-869	-	CTTATC
At3g25120	Arabidopsis thaliana	LEAFYATAG	CCAATGT	-391	-385	+	CCAATGT
At3g25120	Arabidopsis thaliana	MYB binding site promoter	MACCWAMC	-925	-918	+	AACCAAAC
At3g25120	Arabidopsis thaliana	MYB binding site promoter	MACCWAMC	-957	-950	+	AACCAAAC
At3g25120	Arabidopsis thaliana	MYB1AT	WAACCA	-562	-557	-	TGGTTA
At3g25120	Arabidopsis thaliana	MYB1AT	WAACCA	-821	-816	+	AAACCA
At3g25120	Arabidopsis thaliana	MYB1AT	WAACCA	-926	-921	+	TAACCA
At3g25120	Arabidopsis thaliana	MYB1LEPR	GTTAGTT	-842	-836	+	GTTAGTT
At3g25120	Arabidopsis thaliana	MYB4 binding site motif	AMCWAMC	-842	-836	-	GTTAGTT
At3g25120	Arabidopsis thaliana	MYB4 binding site motif	AMCWAMC	-924	-918	+	ACCAAAC
At3g25120	Arabidopsis thaliana	MYB4 binding site motif	AMCWAMC	-956	-950	+	ACCAAAC
At3g25120	Arabidopsis thaliana	T-box promoter motif	ACTTTG	-989	-984	-	CAAAGT

Sequences (FASTA)