ARC Centre of Excellence for Plant Energy Biology

MPIC — UNKNOWN-PRAT-3,UNKNOWN-PRAT-4 CDD Results

Sequences for all species were analysed by CDD (Marchler-Bauer et al. 2011) using default settings. *Columns are described in the CDD documentation.

Domains Genes
SAM_superfamily superfamily 30
Tim17 27
Tim17 superfamily 27
SAM_superfamily 25
SAM 5
QueryHit typePSSM-IDFromToE-ValueBitscoreAccessionShort nameIncompleteSuperfamily
AT3G49560 Species Arabidopsis thalianaspecific1888862012528.5086e-0539.1449cd09487SAM_superfamily - cl15755
AT3G49560 Species Arabidopsis thalianasuperfamily2470572012528.5086e-0539.1449cl15755SAM_superfamily superfamily - -
AT3G49560 Species Arabidopsis thalianaspecific217053561674.88024e-0952.2643pfam02466Tim17 - cl02381
AT3G49560 Species Arabidopsis thalianasuperfamily243015561674.88024e-0952.2643cl02381Tim17 superfamily - -
AT5G24650 Species Arabidopsis thalianaspecific1888861962473.57688e-0540.3005cd09487SAM_superfamily - cl15755
AT5G24650 Species Arabidopsis thalianasuperfamily2470571962473.57688e-0540.3005cl15755SAM_superfamily superfamily - -
AT5G24650 Species Arabidopsis thalianaspecific217053591324.77657e-0849.5679pfam02466Tim17Ccl02381
AT5G24650 Species Arabidopsis thalianasuperfamily243015591324.77657e-0849.5679cl02381Tim17 superfamilyC -
Bra009782 Species Brassica rapaspecific1888862002511.75596e-0541.0709cd09487SAM_superfamily - cl15755
Bra009782 Species Brassica rapasuperfamily2470572002511.75596e-0541.0709cl15755SAM_superfamily superfamily - -
Bra009782 Species Brassica rapaspecific217053631852.36398e-1158.8126pfam02466Tim17 - cl02381
Bra009782 Species Brassica rapasuperfamily243015631852.36398e-1158.8126cl02381Tim17 superfamily - -
Bra017976 Species Brassica rapaspecific1888861802270.00019442737.9893cd09487SAM_superfamily - cl15755
Bra017976 Species Brassica rapasuperfamily2470571802270.00019442737.9893cl15755SAM_superfamily superfamily - -
Bra017976 Species Brassica rapaspecific217053531781.18257e-1261.8942pfam02466Tim17 - cl02381
Bra017976 Species Brassica rapasuperfamily243015531781.18257e-1261.8942cl02381Tim17 superfamily - -
Bra025133 Species Brassica rapaspecific1888861682201.48204e-0951.8565cd09487SAM_superfamily - cl15755
Bra025133 Species Brassica rapasuperfamily2470571682201.48204e-0951.8565cl15755SAM_superfamily superfamily - -
Bra025133 Species Brassica rapaspecific217053331495.68074e-0643.0195pfam02466Tim17 - cl02381
Bra025133 Species Brassica rapasuperfamily243015331495.68074e-0643.0195cl02381Tim17 superfamily - -
Bra025133 Species Brassica rapamulti-dom1977351712212.13307e-0540.7422smart00454SAM - -
Bra041064 Species Brassica rapaspecific188886741245.11421e-0948.7749cd09487SAM_superfamily - cl15755
Bra041064 Species Brassica rapasuperfamily247057741245.11421e-0948.7749cl15755SAM_superfamily superfamily - -
Cre03.g183100.t1.2 Species Chlamydomonas reinhardtiispecific1888861812313.20535e-0643.3821cd09487SAM_superfamily - cl15755
Cre03.g183100.t1.2 Species Chlamydomonas reinhardtiisuperfamily2470571812313.20535e-0643.3821cl15755SAM_superfamily superfamily - -
Cre03.g183100.t1.2 Species Chlamydomonas reinhardtiispecific217053501581.04655e-1159.583pfam02466Tim17 - cl02381
Cre03.g183100.t1.2 Species Chlamydomonas reinhardtiisuperfamily243015501581.04655e-1159.583cl02381Tim17 superfamily - -
Carubv10001771m.g Species Capsella rubellaspecific1888861952462.55962e-0540.6857cd09487SAM_superfamily - cl15755
Carubv10001771m.g Species Capsella rubellasuperfamily2470571952462.55962e-0540.6857cl15755SAM_superfamily superfamily - -
Carubv10001771m.g Species Capsella rubellaspecific217053581805.90869e-1260.3534pfam02466Tim17 - cl02381
Carubv10001771m.g Species Capsella rubellasuperfamily243015581805.90869e-1260.3534cl02381Tim17 superfamily - -
Carubv10017861m.g Species Capsella rubellaspecific1888862012523.78188e-0539.9153cd09487SAM_superfamily - cl15755
Carubv10017861m.g Species Capsella rubellasuperfamily2470572012523.78188e-0539.9153cl15755SAM_superfamily superfamily - -
Carubv10017861m.g Species Capsella rubellaspecific217053571861.16855e-1364.9758pfam02466Tim17 - cl02381
Carubv10017861m.g Species Capsella rubellasuperfamily243015571861.16855e-1364.9758cl02381Tim17 superfamily - -
Cucsa.202450.1 Species Cucumis sativusspecific1888861952460.00012778938.3745cd09487SAM_superfamily - cl15755
Cucsa.202450.1 Species Cucumis sativussuperfamily2470571952460.00012778938.3745cl15755SAM_superfamily superfamily - -
Cucsa.202450.1 Species Cucumis sativusspecific217053601808.17378e-1259.9682pfam02466Tim17 - cl02381
Cucsa.202450.1 Species Cucumis sativussuperfamily243015601808.17378e-1259.9682cl02381Tim17 superfamily - -
Eucgr.A00976.1 Species Eucalyptus grandisspecific217053521831.7959e-0850.7235pfam02466Tim17 - cl02381
Eucgr.A00976.1 Species Eucalyptus grandissuperfamily243015521831.7959e-0850.7235cl02381Tim17 superfamily - -
Eucgr.A00976.1 Species Eucalyptus grandissuperfamily2470571982490.00064826736.4485cl15755SAM_superfamily superfamily - -
Eucgr.K00480.1 Species Eucalyptus grandisspecific1888861972480.00011141738.7597cd09487SAM_superfamily - cl15755
Eucgr.K00480.1 Species Eucalyptus grandissuperfamily2470571972480.00011141738.7597cl15755SAM_superfamily superfamily - -
Eucgr.K00480.1 Species Eucalyptus grandisspecific217053791711.57026e-1056.5015pfam02466Tim17Ncl02381
Eucgr.K00480.1 Species Eucalyptus grandissuperfamily243015791711.57026e-1056.5015cl02381Tim17 superfamilyN -
Eucgr.K00528.1 Species Eucalyptus grandisspecific188886621131.42505e-0538.7597cd09487SAM_superfamily - cl15755
Eucgr.K00528.1 Species Eucalyptus grandissuperfamily247057621131.42505e-0538.7597cl15755SAM_superfamily superfamily - -
Glyma04g40360.1 Species Glycine maxspecific217053601823.78912e-0746.8715pfam02466Tim17 - cl02381
Glyma04g40360.1 Species Glycine maxsuperfamily243015601823.78912e-0746.8715cl02381Tim17 superfamily - -
Glyma04g40360.1 Species Glycine maxsuperfamily2470571972480.00073068936.4485cl15755SAM_superfamily superfamily - -
Glyma06g14420.1 Species Glycine maxspecific217053601821.58674e-1261.8942pfam02466Tim17 - cl02381
Glyma06g14420.1 Species Glycine maxsuperfamily243015601821.58674e-1261.8942cl02381Tim17 superfamily - -
Glyma06g14420.1 Species Glycine maxsuperfamily2470571972480.00068544736.4485cl15755SAM_superfamily superfamily - -
Medtr3g093380.1 Species Medicago truncatulaspecific1888862002511.29329e-0952.6269cd09487SAM_superfamily - cl15755
Medtr3g093380.1 Species Medicago truncatulasuperfamily2470572002511.29329e-0952.6269cl15755SAM_superfamily superfamily - -
Medtr3g093380.1 Species Medicago truncatulaspecific2170531111852.22711e-1056.1163pfam02466Tim17Ncl02381
Medtr3g093380.1 Species Medicago truncatulasuperfamily2430151111852.22711e-1056.1163cl02381Tim17 superfamilyN -
LOC_Os02g32530.1 Species Oryza sativaspecific1888861131642.07393e-0642.2265cd09487SAM_superfamily - cl15755
LOC_Os02g32530.1 Species Oryza sativasuperfamily2470571131642.07393e-0642.2265cl15755SAM_superfamily superfamily - -
LOC_Os02g32530.1 Species Oryza sativaspecific21705322689.49032e-0744.1751pfam02466Tim17Ncl02381
LOC_Os02g32530.1 Species Oryza sativasuperfamily24301522689.49032e-0744.1751cl02381Tim17 superfamilyN -
LOC_Os04g33220.1 Species Oryza sativaspecific1888862072584.40437e-1156.4789cd09487SAM_superfamily - cl15755
LOC_Os04g33220.1 Species Oryza sativasuperfamily2470572072584.40437e-1156.4789cl15755SAM_superfamily superfamily - -
LOC_Os04g33220.1 Species Oryza sativaspecific2170531161627.63012e-0746.1011pfam02466Tim17Ncl02381
LOC_Os04g33220.1 Species Oryza sativasuperfamily2430151161627.63012e-0746.1011cl02381Tim17 superfamilyN -
LOC_Os04g33220.1 Species Oryza sativamulti-dom1977352092578.06201e-0539.2014smart00454SAM - -
Phpat.016G075300.1 Species Physcomitrella patensspecific188886881382.13219e-0949.9305cd09487SAM_superfamily - cl15755
Phpat.016G075300.1 Species Physcomitrella patenssuperfamily247057881382.13219e-0949.9305cl15755SAM_superfamily superfamily - -
Phpat.025G026700.1 Species Physcomitrella patensspecific1888861892407.17405e-1156.0937cd09487SAM_superfamily - cl15755
Phpat.025G026700.1 Species Physcomitrella patenssuperfamily2470571892407.17405e-1156.0937cl15755SAM_superfamily superfamily - -
Phpat.025G026700.1 Species Physcomitrella patensspecific217053351648.74926e-1054.5755pfam02466Tim17 - cl02381
Phpat.025G026700.1 Species Physcomitrella patenssuperfamily243015351648.74926e-1054.5755cl02381Tim17 superfamily - -
Potri.012G004600.1 Species Populus trichocarpaspecific217053781741.2055e-1159.583pfam02466Tim17Ncl02381
Potri.012G004600.1 Species Populus trichocarpasuperfamily243015781741.2055e-1159.583cl02381Tim17 superfamilyN -
Potri.012G004600.1 Species Populus trichocarpasuperfamily2470572002510.0036420634.5225cl15755SAM_superfamily superfamily - -
Potri.015G000600.1 Species Populus trichocarpaspecific1888861982490.00010125538.7597cd09487SAM_superfamily - cl15755
Potri.015G000600.1 Species Populus trichocarpasuperfamily2470571982490.00010125538.7597cl15755SAM_superfamily superfamily - -
Potri.015G000600.1 Species Populus trichocarpaspecific217053551831.6345e-1364.5906pfam02466Tim17 - cl02381
Potri.015G000600.1 Species Populus trichocarpasuperfamily243015551831.6345e-1364.5906cl02381Tim17 superfamily - -
30154.m001133|30154.t000017 Species Ricinus communisspecific1888861982490.00018964637.9893cd09487SAM_superfamily - cl15755
30154.m001133|30154.t000017 Species Ricinus communissuperfamily2470571982490.00018964637.9893cl15755SAM_superfamily superfamily - -
30154.m001133|30154.t000017 Species Ricinus communisspecific217053611722.11313e-1056.1163pfam02466Tim17 - cl02381
30154.m001133|30154.t000017 Species Ricinus communissuperfamily243015611722.11313e-1056.1163cl02381Tim17 superfamily - -
81847 Species Selaginella moellendorffiispecific1888861852372.73811e-1259.5605cd09487SAM_superfamily - cl15755
81847 Species Selaginella moellendorffiisuperfamily2470571852372.73811e-1259.5605cl15755SAM_superfamily superfamily - -
81847 Species Selaginella moellendorffiispecific217053831712.77178e-0747.2567pfam02466Tim17Ncl02381
81847 Species Selaginella moellendorffiisuperfamily243015831712.77178e-0747.2567cl02381Tim17 superfamilyN -
81847 Species Selaginella moellendorffiimulti-dom1977351792362.96853e-0540.357smart00454SAM - -
PGSC0003DMG400000572|PGSC0003DMT400001542 Species Solanum tuberosumspecific217053531853.52889e-1466.5166pfam02466Tim17 - cl02381
PGSC0003DMG400000572|PGSC0003DMT400001542 Species Solanum tuberosumsuperfamily243015531853.52889e-1466.5166cl02381Tim17 superfamily - -
PGSC0003DMG400000572|PGSC0003DMT400001542 Species Solanum tuberosumsuperfamily2470572022540.0022017134.9077cl15755SAM_superfamily superfamily - -
Vocar20007903m.g Species Volvox carterispecific1888861792297.4705e-0847.6193cd09487SAM_superfamily - cl15755
Vocar20007903m.g Species Volvox carterisuperfamily2470571792297.4705e-0847.6193cl15755SAM_superfamily superfamily - -
Vocar20007903m.g Species Volvox carterispecific217053391643.66577e-0952.6495pfam02466Tim17 - cl02381
Vocar20007903m.g Species Volvox carterisuperfamily243015391643.66577e-0952.6495cl02381Tim17 superfamily - -
GSVIVG01038683001|GSVIVT01038683001 Species Vitis viniferaspecific1888861091600.00012985137.2189cd09487SAM_superfamily - cl15755
GSVIVG01038683001|GSVIVT01038683001 Species Vitis viniferasuperfamily2470571091600.00012985137.2189cl15755SAM_superfamily superfamily - -
GSVIVG01038683001|GSVIVT01038683001 Species Vitis viniferaspecific21705318944.29913e-0950.7235pfam02466Tim17Ncl02381
GSVIVG01038683001|GSVIVT01038683001 Species Vitis viniferasuperfamily24301518944.29913e-0950.7235cl02381Tim17 superfamilyN -
GRMZM2G010743_T01 Species Zea maysspecific1888862112621.31359e-1260.7161cd09487SAM_superfamily - cl15755
GRMZM2G010743_T01 Species Zea mayssuperfamily2470572112621.31359e-1260.7161cl15755SAM_superfamily superfamily - -
GRMZM2G010743_T01 Species Zea maysspecific2170531201661.80627e-0644.9455pfam02466Tim17Ncl02381
GRMZM2G010743_T01 Species Zea mayssuperfamily2430151201661.80627e-0644.9455cl02381Tim17 superfamilyN -
GRMZM2G010743_T01 Species Zea maysmulti-dom1977352132611.16427e-0541.8978smart00454SAM - -
GRMZM2G089507_T01 Species Zea maysspecific1888862112629.66983e-0641.8413cd09487SAM_superfamily - cl15755
GRMZM2G089507_T01 Species Zea mayssuperfamily2470572112629.66983e-0641.8413cl15755SAM_superfamily superfamily - -
GRMZM2G089507_T01 Species Zea maysspecific2170531201663.73664e-0644.1751pfam02466Tim17Ncl02381
GRMZM2G089507_T01 Species Zea mayssuperfamily2430151201663.73664e-0644.1751cl02381Tim17 superfamilyN -
GRMZM2G473463_T01 Species Zea maysspecific1888862122635.58436e-1259.1753cd09487SAM_superfamily - cl15755
GRMZM2G473463_T01 Species Zea mayssuperfamily2470572122635.58436e-1259.1753cl15755SAM_superfamily superfamily - -
GRMZM2G473463_T01 Species Zea maysspecific2170531211671.13123e-0748.4123pfam02466Tim17Ncl02381
GRMZM2G473463_T01 Species Zea mayssuperfamily2430151211671.13123e-0748.4123cl02381Tim17 superfamilyN -
GRMZM2G473463_T01 Species Zea maysmulti-dom1977352142629.86804e-0539.2014smart00454SAM - -

Sequences (FASTA)