ARC Centre of Excellence for Plant Energy Biology

MPIC — UNKNOWN-PRAT-1,UNKNOWN-PRAT-2 Transmembrane Helix Domain Predictions

Num_PredHel indicates the number of predicted transmembrane helix domains calculated by DAS and TMHMM predictors (for methods, see MPIC paper). A tally of both predictors is shown first.

Num_PredHel Frequency
1 24
2 5
3 1

1 predicted Species DAS_Num_PredHelTMHMM_Num_PredHel
AT4G26670 Species Arabidopsis thaliana Arabidopsis thaliana 1
AT5G55510 Species Arabidopsis thaliana Arabidopsis thaliana 1
Bra002900 Species Brassica rapa Brassica rapa 1
Bra026412 Species Brassica rapa Brassica rapa 1
Bra028975 Species Brassica rapa Brassica rapa 1
Carubv10005731m.g Species Capsella rubella Capsella rubella 1
Carubv10027112m.g Species Capsella rubella Capsella rubella 1
Cucsa.042410.1 Species Cucumis sativus Cucumis sativus 2
Eucgr.F03519.1 Species Eucalyptus grandis Eucalyptus grandis 2
Glyma0121s00230.2 Species Glycine max Glycine max 1
Glyma02g46620.1 Species Glycine max Glycine max 3
Glyma08g43515.1 Species Glycine max Glycine max 21
Glyma14g02050.1 Species Glycine max Glycine max 1
Glyma18g09772.1 Species Glycine max Glycine max
Glyma18g10010 Species Glycine max Glycine max 11
Medtr5g094300.1 Species Medicago truncatula Medicago truncatula
LOC_Os03g09870.1 Species Oryza sativa Oryza sativa 1
LOC_Os10g22039.1 Species Oryza sativa Oryza sativa 1
LOC_Os12g33020.1 Species Oryza sativa Oryza sativa 1
Phpat.023G040200.1 Species Physcomitrella patens Physcomitrella patens 1
Phpat.024G046400.1 Species Physcomitrella patens Physcomitrella patens
Potri.001G360300.1 Species Populus trichocarpa Populus trichocarpa 2
Potri.011G088500.1 Species Populus trichocarpa Populus trichocarpa 1
27613.m000630|27613.t000023 Species Ricinus communis Ricinus communis 1
68615 Species Selaginella moellendorffii Selaginella moellendorffii 1
PGSC0003DMG401022191|PGSC0003DMT400057120 Species Solanum tuberosum Solanum tuberosum 1
GSVIVG01037765001|GSVIVT01037765001 Species Vitis vinifera Vitis vinifera 2
GRMZM2G072415_T01 Species Zea mays Zea mays 1
GRMZM2G092286_T01 Species Zea mays Zea mays 1
GRMZM2G112640_T01 Species Zea mays Zea mays 1
GRMZM2G120530_T01 Species Zea mays Zea mays 1

Sequences (FASTA)