ARC Centre of Excellence for Plant Energy Biology

MPIC — UNKNOWN-PRAT-1,UNKNOWN-PRAT-2 Athena Promoter Motif Predictions

Putative and known regulatory elements within upstream regions of each gene were obtained from, and enable analysis of co-regulated genes sourced from, Athena: Arabidopsis thaliana a resource for rapid visualization and systematic analysis of Arabidopsis promoter sequences (O’Connor et al. 2005).

Locus Species Motif Pattern Start End Sense Sequence
At4g26670 Species Arabidopsis thaliana Arabidopsis thaliana CARGCW8GATCWWWWWWWWG-89-80+CTATAAAATG
At4g26670 Species Arabidopsis thaliana Arabidopsis thaliana CARGCW8GATCWWWWWWWWG-89-80-CTATAAAATG
At4g26670 Species Arabidopsis thaliana Arabidopsis thaliana EveningElement promoter motifAAAATATCT-21-13+AAAATATCT
At4g26670 Species Arabidopsis thaliana Arabidopsis thaliana MYB2ATTAACTG-149-144+TAACTG
At4g26670 Species Arabidopsis thaliana Arabidopsis thaliana TATA-box MotifTATAAA-88-83+TATAAA
At5g55510 Species Arabidopsis thaliana Arabidopsis thaliana CARGCW8GATCWWWWWWWWG-64-55+CTAATTTTTG
At5g55510 Species Arabidopsis thaliana Arabidopsis thaliana CARGCW8GATCWWWWWWWWG-64-55-CTAATTTTTG
At5g55510 Species Arabidopsis thaliana Arabidopsis thaliana CCA1 binding site motifAAMAATCT-183-176+AAAAATCT

Sequences (FASTA)