ARC Centre of Excellence for Plant Energy Biology

MPIC — UNKNOWN-PRAT-1,UNKNOWN-PRAT-2 CDD Results

Sequences for all species were analysed by CDD (Marchler-Bauer et al. 2011) using default settings. *Columns are described in the CDD documentation.

Domains Genes
Tim17 30
Tim17 superfamily 30
QueryHit typePSSM-IDFromToE-ValueBitscoreAccessionShort nameIncompleteSuperfamily
AT4G26670 Species Arabidopsis thalianaspecific217053421561.74488e-1775.3762pfam02466Tim17 - cl02381
AT4G26670 Species Arabidopsis thalianasuperfamily243015421561.74488e-1775.3762cl02381Tim17 superfamily - -
AT5G55510 Species Arabidopsis thalianaspecific217053871561.33854e-1981.1542pfam02466Tim17Ncl02381
AT5G55510 Species Arabidopsis thalianasuperfamily243015871561.33854e-1981.1542cl02381Tim17 superfamilyN -
Bra002900 Species Brassica rapaspecific217053861555.07383e-2082.3098pfam02466Tim17Ncl02381
Bra002900 Species Brassica rapasuperfamily243015861555.07383e-2082.3098cl02381Tim17 superfamilyN -
Bra026412 Species Brassica rapaspecific217053861553.56603e-1774.2206pfam02466Tim17Ncl02381
Bra026412 Species Brassica rapasuperfamily243015861553.56603e-1774.2206cl02381Tim17 superfamilyN -
Bra028975 Species Brassica rapaspecific217053431773.67223e-1774.6058pfam02466Tim17 - cl02381
Bra028975 Species Brassica rapasuperfamily243015431773.67223e-1774.6058cl02381Tim17 superfamily - -
Carubv10005731m.g Species Capsella rubellaspecific217053421562.86129e-1774.6058pfam02466Tim17 - cl02381
Carubv10005731m.g Species Capsella rubellasuperfamily243015421562.86129e-1774.6058cl02381Tim17 superfamily - -
Carubv10027112m.g Species Capsella rubellaspecific217053911601.3504e-1981.1542pfam02466Tim17Ncl02381
Carubv10027112m.g Species Capsella rubellasuperfamily243015911601.3504e-1981.1542cl02381Tim17 superfamilyN -
Cucsa.042410.1 Species Cucumis sativusspecific217053381501.11093e-1981.1542pfam02466Tim17 - cl02381
Cucsa.042410.1 Species Cucumis sativussuperfamily243015381501.11093e-1981.1542cl02381Tim17 superfamily - -
Eucgr.F03519.1 Species Eucalyptus grandisspecific217053371511.51755e-2186.547pfam02466Tim17 - cl02381
Eucgr.F03519.1 Species Eucalyptus grandissuperfamily243015371511.51755e-2186.547cl02381Tim17 superfamily - -
Glyma0121s00230.2 Species Glycine maxspecific21705315971.32996e-1260.3534pfam02466Tim17Ncl02381
Glyma0121s00230.2 Species Glycine maxsuperfamily24301515971.32996e-1260.3534cl02381Tim17 superfamilyN -
Glyma02g46620.1 Species Glycine maxspecific2170531081809.2134e-2081.9246pfam02466Tim17Ncl02381
Glyma02g46620.1 Species Glycine maxsuperfamily2430151081809.2134e-2081.9246cl02381Tim17 superfamilyN -
Glyma08g43515.1 Species Glycine maxspecific217053621445.13133e-0950.3383pfam02466Tim17Ncl02381
Glyma08g43515.1 Species Glycine maxsuperfamily243015621445.13133e-0950.3383cl02381Tim17 superfamilyN -
Glyma14g02050.1 Species Glycine maxspecific217053801521.79345e-1878.0726pfam02466Tim17Ncl02381
Glyma14g02050.1 Species Glycine maxsuperfamily243015801521.79345e-1878.0726cl02381Tim17 superfamilyN -
Glyma18g09772.1 Species Glycine maxspecific217053461441.46082e-1466.5166pfam02466Tim17 - cl02381
Glyma18g09772.1 Species Glycine maxsuperfamily243015461441.46082e-1466.5166cl02381Tim17 superfamily - -
Glyma18g10010 Species Glycine maxspecific217053461447.01196e-1361.509pfam02466Tim17 - cl02381
Glyma18g10010 Species Glycine maxsuperfamily243015461447.01196e-1361.509cl02381Tim17 superfamily - -
Medtr5g094300.1 Species Medicago truncatulaspecific217053751474.14361e-1774.2206pfam02466Tim17Ncl02381
Medtr5g094300.1 Species Medicago truncatulasuperfamily243015751474.14361e-1774.2206cl02381Tim17 superfamilyN -
LOC_Os03g09870.1 Species Oryza sativaspecific217053421511.10589e-2186.547pfam02466Tim17 - cl02381
LOC_Os03g09870.1 Species Oryza sativasuperfamily243015421511.10589e-2186.547cl02381Tim17 superfamily - -
LOC_Os10g22039.1 Species Oryza sativaspecific217053311432.18187e-1671.9094pfam02466Tim17 - cl02381
LOC_Os10g22039.1 Species Oryza sativasuperfamily243015311432.18187e-1671.9094cl02381Tim17 superfamily - -
LOC_Os12g33020.1 Species Oryza sativaspecific217053721841.21409e-2084.2358pfam02466Tim17 - cl02381
LOC_Os12g33020.1 Species Oryza sativasuperfamily243015721841.21409e-2084.2358cl02381Tim17 superfamily - -
Phpat.023G040200.1 Species Physcomitrella patensspecific217053451607.07019e-2185.0062pfam02466Tim17 - cl02381
Phpat.023G040200.1 Species Physcomitrella patenssuperfamily243015451607.07019e-2185.0062cl02381Tim17 superfamily - -
Phpat.024G046400.1 Species Physcomitrella patensspecific217053791625.5008e-2082.3098pfam02466Tim17Ncl02381
Phpat.024G046400.1 Species Physcomitrella patenssuperfamily243015791625.5008e-2082.3098cl02381Tim17 superfamilyN -
Potri.001G360300.1 Species Populus trichocarpaspecific217053421543.91219e-1979.9986pfam02466Tim17 - cl02381
Potri.001G360300.1 Species Populus trichocarpasuperfamily243015421543.91219e-1979.9986cl02381Tim17 superfamily - -
Potri.011G088500.1 Species Populus trichocarpaspecific217053461583.27384e-2185.7766pfam02466Tim17 - cl02381
Potri.011G088500.1 Species Populus trichocarpasuperfamily243015461583.27384e-2185.7766cl02381Tim17 superfamily - -
68615 Species Selaginella moellendorffiispecific21705311025.81217e-1463.8202pfam02466Tim17 - cl02381
68615 Species Selaginella moellendorffiisuperfamily24301511025.81217e-1463.8202cl02381Tim17 superfamily - -
PGSC0003DMG401022191|PGSC0003DMT400057120 Species Solanum tuberosumspecific217053451571.05608e-2186.9322pfam02466Tim17 - cl02381
PGSC0003DMG401022191|PGSC0003DMT400057120 Species Solanum tuberosumsuperfamily243015451571.05608e-2186.9322cl02381Tim17 superfamily - -
GSVIVG01037765001|GSVIVT01037765001 Species Vitis viniferaspecific21705324961.38055e-1876.917pfam02466Tim17Ncl02381
GSVIVG01037765001|GSVIVT01037765001 Species Vitis viniferasuperfamily24301524961.38055e-1876.917cl02381Tim17 superfamilyN -
GRMZM2G072415_T01 Species Zea maysspecific217053431392.96555e-1979.6134pfam02466Tim17Ncl02381
GRMZM2G072415_T01 Species Zea mayssuperfamily243015431392.96555e-1979.6134cl02381Tim17 superfamilyN -
GRMZM2G092286_T01 Species Zea maysspecific217053981911.55092e-1775.7614pfam02466Tim17Ncl02381
GRMZM2G092286_T01 Species Zea mayssuperfamily243015981911.55092e-1775.7614cl02381Tim17 superfamilyN -
GRMZM2G112640_T01 Species Zea maysspecific217053651771.00126e-2187.3174pfam02466Tim17 - cl02381
GRMZM2G112640_T01 Species Zea mayssuperfamily243015651771.00126e-2187.3174cl02381Tim17 superfamily - -
GRMZM2G120530_T01 Species Zea maysspecific217053651775.71105e-2082.3098pfam02466Tim17 - cl02381
GRMZM2G120530_T01 Species Zea mayssuperfamily243015651775.71105e-2082.3098cl02381Tim17 superfamily - -

Sequences (FASTA)