ARC Centre of Excellence for Plant Energy Biology

MPIC — TOM9,TOM22 Targeting Predictions

Computational targeting prediction programs were run en bloc for all included species using each algorithm’s default parameters applicable per species kingdom (Boden and Hawkins 2005; Claros 1995; Emanuelsson et al. 2000; Emanuelsson et al. 1999; Neuberger et al. 2003; Small et al. 2004).

Prediction Frequency
mTP 12
cTP 12

Abbreviations

cTP: chloroplast targeting peptide (plants only)
ER: endoplasmic reticulum
mTP: mitochrondrial targeting peptide
SP: signal peptide / secretory pathway

mTP predicted plus 1 other Species ChloroPMitoProt2PProwlerPredotarPTS1TargetP
AT1G04070 Species Arabidopsis thaliana Arabidopsis thaliana
AT5G43970 Species Arabidopsis thaliana Arabidopsis thaliana
Bra015286 Species Brassica rapa Brassica rapa
Bra027518 Species Brassica rapa Brassica rapa
Bra033708 Species Brassica rapa Brassica rapa
gi|17536841 Species Caenorhabditis elegans Caenorhabditis elegans
CMG115C Species Cyanidioschyzon merolae Cyanidioschyzon merolae
Carubv10012272 Species Capsella rubella Capsella rubella
Carubv10028217 Species Capsella rubella Capsella rubella
Cucsa.255780 Species Cucumis sativus Cucumis sativus cTP
Cucsa.383300 Species Cucumis sativus Cucumis sativus cTP
Eucgr.K01430 Species Eucalyptus grandis Eucalyptus grandis mTP
gi|298709439 Species Ectocarpus siliculosus Ectocarpus siliculosus
Glyma02g18110 Species Glycine max Glycine max mTP
Glyma10g04590 Species Glycine max Glycine max cTPcTP
Glyma11g23890 Species Glycine max Glycine max mTP
Glyma11g28430 Species Glycine max Glycine max cTPmTP
Glyma13g18900.1 Species Glycine max Glycine max cTPmTP
BAB16408.1|dbj|gi|10716801|Tom22 [Homo sapiens] Species Homo sapiens Homo sapiens
Medtr1g045510 Species Medicago truncatula Medicago truncatula
gi|85081308 Species Neurospora crassa Neurospora crassa
gi|85101402 Species Neurospora crassa Neurospora crassa
LOC_Os02g03880 Species Oryza sativa Oryza sativa
LOC_Os02g29400 Species Oryza sativa Oryza sativa mTP
Phpat.003G070700 Species Physcomitrella patens Physcomitrella patens
Phpat.024G004500 Species Physcomitrella patens Physcomitrella patens cTPcTP
Potri.002G257200 Species Populus trichocarpa Populus trichocarpa mTP
Potri.008G171800 Species Populus trichocarpa Populus trichocarpa mTP
Potri.014G192600 Species Populus trichocarpa Populus trichocarpa mTP
29637.t000021 Species Ricinus communis Ricinus communis cTPmTP
30008.t000024 Species Ricinus communis Ricinus communis
YNL131W Species Saccharomyces cerevisiae Saccharomyces cerevisiae
29398 Species Selaginella moellendorffii Selaginella moellendorffii
99926 Species Selaginella moellendorffii Selaginella moellendorffii
PGSC0003DMG400013457 Species Solanum tuberosum Solanum tuberosum cTPmTP
GSVIVG01027914001 Species Vitis vinifera Vitis vinifera cTPcTP
GSVIVG01028415001 Species Vitis vinifera Vitis vinifera mTP
GRMZM2G318794 Species Zea mays Zea mays

Sequences (FASTA)