ARC Centre of Excellence for Plant Energy Biology

MPIC — TOM9,TOM22 Athena Promoter Motif Predictions

Putative and known regulatory elements within upstream regions of each gene were obtained from, and enable analysis of co-regulated genes sourced from, Athena: Arabidopsis thaliana a resource for rapid visualization and systematic analysis of Arabidopsis promoter sequences (O’Connor et al. 2005).

Locus Species Motif Pattern Start End Sense Sequence
At1g04070 Species Arabidopsis thaliana Arabidopsis thaliana DRE core motifRCCGAC-114-109-GTCGGC
At5g43970 Species Arabidopsis thaliana Arabidopsis thaliana ARF binding site motifTGTCTC-186-181-GAGACA
At5g43970 Species Arabidopsis thaliana Arabidopsis thaliana ATHB2ATCONSENSUSCAATSATTG-85-77+CAATCATTG
At5g43970 Species Arabidopsis thaliana Arabidopsis thaliana ATHB2ATCONSENSUSCAATSATTG-85-77-CAATCATTG
At5g43970 Species Arabidopsis thaliana Arabidopsis thaliana ATHB5ATCORECAATNATTG-85-77+CAATCATTG
At5g43970 Species Arabidopsis thaliana Arabidopsis thaliana ATHB5ATCORECAATNATTG-85-77-CAATCATTG
At5g43970 Species Arabidopsis thaliana Arabidopsis thaliana AtMYC2 BS in RD22CACATG-245-240-CATGTG
At5g43970 Species Arabidopsis thaliana Arabidopsis thaliana BoxII promoter motifGGTTAA-686-681-TTAACC
At5g43970 Species Arabidopsis thaliana Arabidopsis thaliana CARGCW8GATCWWWWWWWWG-583-574+CTTTATATTG
At5g43970 Species Arabidopsis thaliana Arabidopsis thaliana CARGCW8GATCWWWWWWWWG-583-574-CTTTATATTG
At5g43970 Species Arabidopsis thaliana Arabidopsis thaliana GAREATTAACAAR-646-640+TAACAAA
At5g43970 Species Arabidopsis thaliana Arabidopsis thaliana MYB1ATWAACCA-163-158-TGGTTA
At5g43970 Species Arabidopsis thaliana Arabidopsis thaliana MYB1ATWAACCA-655-650+AAACCA
At5g43970 Species Arabidopsis thaliana Arabidopsis thaliana MYB4 binding site motifAMCWAMC-434-428+ACCAAAC
At5g43970 Species Arabidopsis thaliana Arabidopsis thaliana MYB4 binding site motifAMCWAMC-462-456-GTTTGTT
At5g43970 Species Arabidopsis thaliana Arabidopsis thaliana MYB4 binding site motifAMCWAMC-645-639+AACAAAC
At5g43970 Species Arabidopsis thaliana Arabidopsis thaliana MYCATERD1CATGTG-245-240+CATGTG
At5g43970 Species Arabidopsis thaliana Arabidopsis thaliana T-box promoter motifACTTTG-391-386-CAAAGT
At5g43970 Species Arabidopsis thaliana Arabidopsis thaliana T-box promoter motifACTTTG-466-461-CAAAGT
At5g43970 Species Arabidopsis thaliana Arabidopsis thaliana TATA-box MotifTATAAA-582-577-TTTATA
At5g43970 Species Arabidopsis thaliana Arabidopsis thaliana TATA-box MotifTATAAA-632-627-TTTATA
At5g43970 Species Arabidopsis thaliana Arabidopsis thaliana W-box promoter motifTTGACY-308-303+TTGACT
At5g43970 Species Arabidopsis thaliana Arabidopsis thaliana W-box promoter motifTTGACY-388-383-AGTCAA

Sequences (FASTA)