ARC Centre of Excellence for Plant Energy Biology

MPIC — TOM70,TPR1,TPR13,TTL4,TOM72 Targeting Predictions

Computational targeting prediction programs were run en bloc for all included species using each algorithm’s default parameters applicable per species kingdom (Boden and Hawkins 2005; Claros 1995; Emanuelsson et al. 2000; Emanuelsson et al. 1999; Neuberger et al. 2003; Small et al. 2004).

Abbreviations

cTP: chloroplast targeting peptide (plants only)
ER: endoplasmic reticulum
mTP: mitochrondrial targeting peptide
SP: signal peptide / secretory pathway

MPIC Gene Locus Species ChloroPMitoProt2PProwlerPredotarPTS1TargetP
gi|66801325 Species Dictyostelium discoideum Dictyostelium discoideum
gi|66805793 Species Dictyostelium discoideum Dictyostelium discoideum
Esi0232_0002 Species Ectocarpus siliculosus Ectocarpus siliculosus
Esi_0007_0019 Species Ectocarpus siliculosus Ectocarpus siliculosus
gi|544063423 Species Homo sapiens Homo sapiens
gi|54607135 Species Homo sapiens Homo sapiens
gi|5803181 Species Homo sapiens Homo sapiens
gi|85081220 Species Neurospora crassa Neurospora crassa
gi|85101921 Species Neurospora crassa Neurospora crassa
YHR117W Species Saccharomyces cerevisiae Saccharomyces cerevisiae
YNL121C Species Saccharomyces cerevisiae Saccharomyces cerevisiae

Sequences (FASTA)