ARC Centre of Excellence for Plant Energy Biology

MPIC — TOM70,TPR1,TPR13,TTL4,TOM72 – gi|54607135 InterPro Results

Sequences were analysed by InterPro (Zdobnov and Apweiler 2001) using default settings.

Database Detected Description Start End E-Value
InterPro IPR001440 Tetratricopeptide TPR1:
Pfam PF00515 Tetratricopeptide repeat 156 186 5.9E-5
Pfam PF00515 Tetratricopeptide repeat 114 146 1.1E-9
InterPro IPR011990 Tetratricopeptide-like helical domain:
Gene3D G3DSA:1.25.40.10 298 571 7.0E-46
Gene3D G3DSA:1.25.40.10 112 218 3.6E-31
InterPro IPR013026 Tetratricopeptide repeat-containing domain:
ProSiteProfiles PS50293 TPR repeat region circular profile. 114 578 0.0
InterPro IPR019734 Tetratricopeptide repeat:
Pfam PF13181 Tetratricopeptide repeat 548 576 0.034
ProSiteProfiles PS50005 TPR repeat profile. 153 186 0.0
ProSiteProfiles PS50005 TPR repeat profile. 545 578 0.0
ProSiteProfiles PS50005 TPR repeat profile. 329 362 0.0
ProSiteProfiles PS50005 TPR repeat profile. 401 434 0.0
ProSiteProfiles PS50005 TPR repeat profile. 367 400 0.0
ProSiteProfiles PS50005 TPR repeat profile. 476 509 0.0
ProSiteProfiles PS50005 TPR repeat profile. 114 147 0.0
SMART SM00028 Tetratricopeptide repeats 476 509 0.003600000387
SMART SM00028 Tetratricopeptide repeats 367 400 0.002200000218
SMART SM00028 Tetratricopeptide repeats 329 362 0.008199999566
SMART SM00028 Tetratricopeptide repeats 401 434 2.500000864E-5
SMART SM00028 Tetratricopeptide repeats 114 147 4.000003009E-10
SMART SM00028 Tetratricopeptide repeats 187 220 0.06000000323
SMART SM00028 Tetratricopeptide repeats 545 578 0.01600000211
SMART SM00028 Tetratricopeptide repeats 153 186 7.299997894E-6
InterPro No IPR Unintegrated signatures:
PANTHER PTHR22904 35 604 0.0
PANTHER PTHR22904:SF178 35 604 0.0
Pfam PF13414 TPR repeat 477 541 8.1E-9
Pfam PF13414 TPR repeat 366 432 8.6E-9
Phobius CYTOPLASMIC_DOMAIN Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. 60 608 -
Phobius NON_CYTOPLASMIC_DOMAIN Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. 1 38 -
Phobius TRANSMEMBRANE Region of a membrane-bound protein predicted to be embedded in the membrane. 39 59 -
SUPERFAMILY SSF48452 304 595 0.0
SUPERFAMILY SSF48452 112 215 0.0
TMHMM TMhelix Region of a membrane-bound protein predicted to be embedded in the membrane. 39 61 -
TMHMM TMhelix Region of a membrane-bound protein predicted to be embedded in the membrane. 7 29 -

InterPro
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Courtesy of EMBL-EBI

Sequences (FASTA)