ARC Centre of Excellence for Plant Energy Biology

MPIC — TOM70,TPR1,TPR13,TTL4,TOM72 – YHR117W InterPro Results

Sequences for Saccharomyces cerevisiae were analysed by InterPro (Zdobnov and Apweiler 2001) using default settings.

Database Detected Description Start End E-Value
InterPro IPR001440 Tetratricopeptide TPR1:
Pfam PF00515 Tetratricopeptide repeat 165 194 0.0061
Pfam PF00515 Tetratricopeptide repeat 414 445 1.3E-8
Pfam PF00515 Tetratricopeptide repeat 129 159 5.1E-8
InterPro IPR011990 Tetratricopeptide-like helical domain:
Gene3D G3DSA:1.25.40.10 125 219 8.7E-30
Gene3D G3DSA:1.25.40.10 339 588 3.8E-40
Gene3D G3DSA:1.25.40.10 289 306 3.8E-40
InterPro IPR013026 Tetratricopeptide repeat-containing domain:
ProSiteProfiles PS50293 TPR repeat region circular profile. 378 597 0.0
ProSiteProfiles PS50293 TPR repeat region circular profile. 127 215 0.0
InterPro IPR019734 Tetratricopeptide repeat:
Pfam PF13181 Tetratricopeptide repeat 379 409 0.21
ProSiteProfiles PS50005 TPR repeat profile. 161 194 0.0
ProSiteProfiles PS50005 TPR repeat profile. 127 160 0.0
ProSiteProfiles PS50005 TPR repeat profile. 378 411 0.0
ProSiteProfiles PS50005 TPR repeat profile. 564 597 0.0
ProSiteProfiles PS50005 TPR repeat profile. 412 445 0.0
ProSiteProfiles PS50005 TPR repeat profile. 480 513 0.0
ProSiteProfiles PS50005 TPR repeat profile. 530 563 0.0
SMART SM00028 Tetratricopeptide repeats 412 445 8.600006647E-10
SMART SM00028 Tetratricopeptide repeats 378 411 0.0589999943
SMART SM00028 Tetratricopeptide repeats 195 227 0.3599999893
SMART SM00028 Tetratricopeptide repeats 127 160 2.19999901E-8
SMART SM00028 Tetratricopeptide repeats 446 479 0.05100000224
SMART SM00028 Tetratricopeptide repeats 161 194 1.499999776E-4
SMART SM00028 Tetratricopeptide repeats 564 597 0.076999996
InterPro No IPR Unintegrated signatures:
Coils Coil 570 591 -
PANTHER PTHR22904 91 634 0.0
PANTHER PTHR22904:SF303 91 634 0.0
Pfam PF14559 Tetratricopeptide repeat 541 589 1.3E-5
Phobius CYTOPLASMIC_DOMAIN Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. 1 14 -
Phobius NON_CYTOPLASMIC_DOMAIN Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. 35 639 -
Phobius TRANSMEMBRANE Region of a membrane-bound protein predicted to be embedded in the membrane. 15 34 -
SUPERFAMILY SSF48452 477 588 0.0
SUPERFAMILY SSF48452 344 509 0.0
SUPERFAMILY SSF48452 125 219 0.0

InterPro
Clickable SVG
Courtesy of EMBL-EBI

Sequences (FASTA)