ARC Centre of Excellence for Plant Energy Biology

MPIC — TOM6 Transmembrane Helix Domain Predictions

Num_PredHel indicates the number of predicted transmembrane helix domains calculated by DAS and TMHMM predictors (for methods, see MPIC paper). A tally of both predictors is shown first.

Num_PredHel Frequency
1 22

1 predicted Species DAS_Num_PredHelTMHMM_Num_PredHel
AT1G49410 Species Arabidopsis thaliana Arabidopsis thaliana 11
Bra014187 Species Brassica rapa Brassica rapa 11
Cucsa.109920.1 Species Cucumis sativus Cucumis sativus 11
Glyma11g13030.2 Species Glycine max Glycine max 1
Glyma12g05120 Species Glycine max Glycine max 1
Glyma12g08730 Species Glycine max Glycine max
Glyma16g06370 Species Glycine max Glycine max 11
gi|186939605 Species Homo sapiens Homo sapiens
gi|13324616 Species Neurospora crassa Neurospora crassa 1
Phpat.005G084200 Species Physcomitrella patens Physcomitrella patens 1
Phpat.006G025100 Species Physcomitrella patens Physcomitrella patens 11
Potri.004G149200 Species Populus trichocarpa Populus trichocarpa 1
Potri.009G110100 Species Populus trichocarpa Populus trichocarpa 1
29851.m002468|29851.t000110 Species Ricinus communis Ricinus communis 11
YOR045W Species Saccharomyces cerevisiae Saccharomyces cerevisiae 11
PGSC0003DMG400025161|PGSC0003DMT400064778 Species Solanum tuberosum Solanum tuberosum 11

Sequences (FASTA)