ARC Centre of Excellence for Plant Energy Biology

MPIC — TOM6 Athena Promoter Motif Predictions

Putative and known regulatory elements within upstream regions of each gene were obtained from, and enable analysis of co-regulated genes sourced from, Athena: Arabidopsis thaliana a resource for rapid visualization and systematic analysis of Arabidopsis promoter sequences (O’Connor et al. 2005).

Locus Species Motif Pattern Start End Sense Sequence
At1g49410 Species Arabidopsis thaliana Arabidopsis thaliana ARF binding site motifTGTCTC-270-265+TGTCTC
At1g49410 Species Arabidopsis thaliana Arabidopsis thaliana BoxII promoter motifGGTTAA-708-703-TTAACC
At1g49410 Species Arabidopsis thaliana Arabidopsis thaliana CARGCW8GATCWWWWWWWWG-161-152+CATATTAAAG
At1g49410 Species Arabidopsis thaliana Arabidopsis thaliana CARGCW8GATCWWWWWWWWG-161-152-CATATTAAAG
At1g49410 Species Arabidopsis thaliana Arabidopsis thaliana CARGCW8GATCWWWWWWWWG-240-231+CAATTAAATG
At1g49410 Species Arabidopsis thaliana Arabidopsis thaliana CARGCW8GATCWWWWWWWWG-240-231-CAATTAAATG
At1g49410 Species Arabidopsis thaliana Arabidopsis thaliana CARGCW8GATCWWWWWWWWG-489-480+CTTATTTTTG
At1g49410 Species Arabidopsis thaliana Arabidopsis thaliana CARGCW8GATCWWWWWWWWG-489-480-CTTATTTTTG
At1g49410 Species Arabidopsis thaliana Arabidopsis thaliana DRE core motifRCCGAC-191-186+GCCGAC
At1g49410 Species Arabidopsis thaliana Arabidopsis thaliana MYB1ATWAACCA-673-668-TGGTTT
At1g49410 Species Arabidopsis thaliana Arabidopsis thaliana MYB4 binding site motifAMCWAMC-766-760-GTTTGGT
At1g49410 Species Arabidopsis thaliana Arabidopsis thaliana TATA-box MotifTATAAA-320-315-TTTATA
At1g49410 Species Arabidopsis thaliana Arabidopsis thaliana TATA-box MotifTATAAA-419-414+TATAAA
At1g49410 Species Arabidopsis thaliana Arabidopsis thaliana TATA-box MotifTATAAA-583-578-TTTATA
At1g49410 Species Arabidopsis thaliana Arabidopsis thaliana TATA-box MotifTATAAA-623-618+TATAAA
At1g49410 Species Arabidopsis thaliana Arabidopsis thaliana TATA-box MotifTATAAA-629-624+TATAAA
At1g49410 Species Arabidopsis thaliana Arabidopsis thaliana TATA-box MotifTATAAA-668-663-TTTATA
At1g49410 Species Arabidopsis thaliana Arabidopsis thaliana TELO-box promoter motifAAACCCTAA-65-57-TTAGGGTTT

Sequences (FASTA)