ARC Centre of Excellence for Plant Energy Biology

MPIC — TOM5 Athena Promoter Motif Predictions

Putative and known regulatory elements within upstream regions of each gene were obtained from, and enable analysis of co-regulated genes sourced from, Athena: Arabidopsis thaliana a resource for rapid visualization and systematic analysis of Arabidopsis promoter sequences (O’Connor et al. 2005).

Locus Species Motif Pattern Start End Sense Sequence
At5g08040 Species Arabidopsis thaliana Arabidopsis thaliana ABRE-like binding site motifBACGTGKM-182-175+CACGTGTC
At5g08040 Species Arabidopsis thaliana Arabidopsis thaliana ACGTABREMOTIFA2OSEMACGTGKC-181-175+ACGTGTC
At5g08040 Species Arabidopsis thaliana Arabidopsis thaliana BoxII promoter motifGGTTAA-163-158+GGTTAA
At5g08040 Species Arabidopsis thaliana Arabidopsis thaliana BoxII promoter motifGGTTAA-51-46-TTAACC
At5g08040 Species Arabidopsis thaliana Arabidopsis thaliana CACGTGMOTIFCACGTG-182-177+CACGTG
At5g08040 Species Arabidopsis thaliana Arabidopsis thaliana CACGTGMOTIFCACGTG-182-177-CACGTG
At5g08040 Species Arabidopsis thaliana Arabidopsis thaliana DRE core motifRCCGAC-48-43+ACCGAC
At5g08040 Species Arabidopsis thaliana Arabidopsis thaliana GADOWNATACGTGTC-181-175+ACGTGTC
At5g08040 Species Arabidopsis thaliana Arabidopsis thaliana MYB1ATWAACCA-164-159-TGGTTA
At5g08040 Species Arabidopsis thaliana Arabidopsis thaliana MYB1ATWAACCA-245-240+AAACCA
At5g08040 Species Arabidopsis thaliana Arabidopsis thaliana MYB1LEPRGTTAGTT-91-85+GTTAGTT
At5g08040 Species Arabidopsis thaliana Arabidopsis thaliana MYB4 binding site motifAMCWAMC-87-81-GTTTGGT
At5g08040 Species Arabidopsis thaliana Arabidopsis thaliana MYB4 binding site motifAMCWAMC-91-85-GTTAGTT

Sequences (FASTA)