ARC Centre of Excellence for Plant Energy Biology

MPIC — TOM40 Athena Promoter Motif Predictions

Putative and known regulatory elements within upstream regions of each gene were obtained from, and enable analysis of co-regulated genes sourced from, Athena: Arabidopsis thaliana a resource for rapid visualization and systematic analysis of Arabidopsis promoter sequences (O’Connor et al. 2005).

Locus Species Motif Pattern Start End Sense Sequence
At1g50400 Species Arabidopsis thaliana Arabidopsis thaliana DRE core motifRCCGAC-191-186-GTCGGT
At1g50400 Species Arabidopsis thaliana Arabidopsis thaliana DREB1A /CBF3RCCGACNT-193-186-AGGTCGGT
At1g50400 Species Arabidopsis thaliana Arabidopsis thaliana W-box promoter motifTTGACY-104-99-AGTCAA
At1g50400 Species Arabidopsis thaliana Arabidopsis thaliana W-box promoter motifTTGACY-353-348+TTGACT
At3g20000 Species Arabidopsis thaliana Arabidopsis thaliana BoxII promoter motifGGTTAA-314-309-TTAACC
At3g20000 Species Arabidopsis thaliana Arabidopsis thaliana GATA MotifAAGATAAGATT-329-319+AAGATAAGATT
At3g20000 Species Arabidopsis thaliana Arabidopsis thaliana Ibox promoter motifGATAAG-327-322+GATAAG
At3g20000 Species Arabidopsis thaliana Arabidopsis thaliana MYB1ATWAACCA-313-308+TAACCA
At3g20000 Species Arabidopsis thaliana Arabidopsis thaliana MYB1ATWAACCA-76-71+AAACCA
At3g20000 Species Arabidopsis thaliana Arabidopsis thaliana MYB4 binding site motifAMCWAMC-89-83+ACCAAAC
At3g20000 Species Arabidopsis thaliana Arabidopsis thaliana TATA-box MotifTATAAA-215-210+TATAAA
At3g20000 Species Arabidopsis thaliana Arabidopsis thaliana TATA-box MotifTATAAA-219-214-TTTATA

Sequences (FASTA)