ARC Centre of Excellence for Plant Energy Biology

MPIC — TOM20 Transmembrane Helix Domain Predictions

Num_PredHel indicates the number of predicted transmembrane helix domains calculated by DAS and TMHMM predictors (for methods, see MPIC paper). A tally of both predictors is shown first.

Num_PredHel Frequency
1 74
2 3
3 1
4 2
5 1

1 predicted Species DAS_Num_PredHelTMHMM_Num_PredHel
AT1G27390 Species Arabidopsis thaliana Arabidopsis thaliana 11
AT3G27070 Species Arabidopsis thaliana Arabidopsis thaliana 43
AT3G27080 Species Arabidopsis thaliana Arabidopsis thaliana 11
AT5G40930 Species Arabidopsis thaliana Arabidopsis thaliana 11
Bra010946 Species Brassica rapa Brassica rapa 11
Bra030044 Species Brassica rapa Brassica rapa 11
Bra032826 Species Brassica rapa Brassica rapa 11
Bra032980 Species Brassica rapa Brassica rapa 11
gi|17560096 Species Caenorhabditis elegans Caenorhabditis elegans 1
Carubv10005798 Species Capsella rubella Capsella rubella 11
Carubv10018043 Species Capsella rubella Capsella rubella 11
Carubv10018077 Species Capsella rubella Capsella rubella 11
Cucsa.054120.1 Species Cucumis sativus Cucumis sativus 11
Cucsa.395030.1 Species Cucumis sativus Cucumis sativus 21
XP_642798 Species Dictyostelium discoideum Dictyostelium discoideum
Eucgr.I01647 Species Eucalyptus grandis Eucalyptus grandis 11
CBJ27905.1|emb|gi|298715256 Species Ectocarpus siliculosus Ectocarpus siliculosus
Glyma05g14300.1 Species Glycine max Glycine max 11
Glyma11g37120.1 Species Glycine max Glycine max 11
Glyma18g01030.2 Species Glycine max Glycine max
Glyma19g17930 Species Glycine max Glycine max 11
gi|46409384 Species Homo sapiens Homo sapiens 11
Medtr3g085410 Species Medicago truncatula Medicago truncatula 11
Medtr3g085420 Species Medicago truncatula Medicago truncatula 54
Medtr6g012540 Species Medicago truncatula Medicago truncatula 1
Medtr6g044560 Species Medicago truncatula Medicago truncatula 1
Medtr7g099160 Species Medicago truncatula Medicago truncatula 11
gi|85104848 Species Neurospora crassa Neurospora crassa 11
LOC_Os01g69250 Species Oryza sativa Oryza sativa 11
Phpat.016G052500 Species Physcomitrella patens Physcomitrella patens 11
Phpat.027G024400 Species Physcomitrella patens Physcomitrella patens 11
Potri.001G054900 Species Populus trichocarpa Populus trichocarpa 11
Potri.001G330200 Species Populus trichocarpa Populus trichocarpa 11
Potri.003G173400 Species Populus trichocarpa Populus trichocarpa 11
29929.t000160 Species Ricinus communis Ricinus communis 11
30190.t000164 Species Ricinus communis Ricinus communis 11
g13148.t1 Species Ricinus communis Ricinus communis 1
YGR082W Species Saccharomyces cerevisiae Saccharomyces cerevisiae 21
437971 Species Selaginella moellendorffii Selaginella moellendorffii 11
74372 Species Selaginella moellendorffii Selaginella moellendorffii 11
PGSC0003DMG400020255 Species Solanum tuberosum Solanum tuberosum 11
PGSC0003DMG401022140 Species Solanum tuberosum Solanum tuberosum 11
PGSC0003DMG402022140 Species Solanum tuberosum Solanum tuberosum
gi|302850820|ref|XP_002956936.1 Species Volvox carteri Volvox carteri 2
GSVIVG01033094001 Species Vitis vinifera Vitis vinifera 11
GRMZM2G100402 Species Zea mays Zea mays 11
GRMZM2G105531_T01 Species Zea mays Zea mays 11
GRMZM2G314434_T01 Species Zea mays Zea mays

Sequences (FASTA)