MPIC
Putative and known regulatory elements within upstream regions of each gene were obtained from, and enable analysis of co-regulated genes sourced from, Athena: Arabidopsis thaliana a resource for rapid visualization and systematic analysis of Arabidopsis promoter sequences (O’Connor et al. 2005).
| Locus | Species | Motif | Pattern | Start | End | Sense | Sequence |
|---|---|---|---|---|---|---|---|
At1g27390  |
Arabidopsis thaliana | Ibox promoter motif | GATAAG | -64 | -59 | + | GATAAG |
| At1g27390 |
Arabidopsis thaliana | Ibox promoter motif | GATAAG | -72 | -67 | - | CTTATC |
| At3g27070 |
Arabidopsis thaliana | MYB4 binding site motif | AMCWAMC | -240 | -234 | - | GTTTGTT |
| At3g27070 |
Arabidopsis thaliana | SV40 core promoter motif | GTGGWWHG | -175 | -168 | - | CAATCCAC |
| At3g27070 |
Arabidopsis thaliana | T-box promoter motif | ACTTTG | -211 | -206 | - | CAAAGT |
| At3g27070 |
Arabidopsis thaliana | W-box promoter motif | TTGACY | -229 | -224 | + | TTGACT |
| At3g27080 |
Arabidopsis thaliana | AtMYB2 BS in RD22 | CTAACCA | -945 | -939 | + | CTAACCA |
| At3g27080 |
Arabidopsis thaliana | AtMYC2 BS in RD22 | CACATG | -311 | -306 | - | CATGTG |
| At3g27080 |
Arabidopsis thaliana | AtMYC2 BS in RD22 | CACATG | -394 | -389 | - | CATGTG |
| At3g27080 |
Arabidopsis thaliana | AtMYC2 BS in RD22 | CACATG | -884 | -879 | - | CATGTG |
| At3g27080 |
Arabidopsis thaliana | AtMYC2 BS in RD22 | CACATG | -886 | -881 | + | CACATG |
| At3g27080 |
Arabidopsis thaliana | DRE core motif | RCCGAC | -725 | -720 | + | GCCGAC |
| At3g27080 |
Arabidopsis thaliana | GAREAT | TAACAAR | -868 | -862 | + | TAACAAA |
| At3g27080 |
Arabidopsis thaliana | Ibox promoter motif | GATAAG | -367 | -362 | - | CTTATC |
| At3g27080 |
Arabidopsis thaliana | MYB1AT | WAACCA | -944 | -939 | + | TAACCA |
| At3g27080 |
Arabidopsis thaliana | MYCATERD1 | CATGTG | -311 | -306 | + | CATGTG |
| At3g27080 |
Arabidopsis thaliana | MYCATERD1 | CATGTG | -394 | -389 | + | CATGTG |
| At3g27080 |
Arabidopsis thaliana | MYCATERD1 | CATGTG | -884 | -879 | + | CATGTG |
| At3g27080 |
Arabidopsis thaliana | MYCATERD1 | CATGTG | -886 | -881 | - | CACATG |
| At3g27080 |
Arabidopsis thaliana | RAV1-B binding site motif | CACCTG | -304 | -299 | - | CAGGTG |
| At3g27080 |
Arabidopsis thaliana | T-box promoter motif | ACTTTG | -933 | -928 | + | ACTTTG |
| At3g27080 |
Arabidopsis thaliana | TATA-box Motif | TATAAA | -495 | -490 | + | TATAAA |
| At3g27080 |
Arabidopsis thaliana | TATA-box Motif | TATAAA | -681 | -676 | - | TTTATA |
| At3g27080 |
Arabidopsis thaliana | TATA-box Motif | TATAAA | -824 | -819 | + | TATAAA |
| At3g27080 |
Arabidopsis thaliana | TATA-box Motif | TATAAA | -841 | -836 | + | TATAAA |
| At3g27080 |
Arabidopsis thaliana | TATA-box Motif | TATAAA | -843 | -838 | - | TTTATA |
| At5g40930 |
Arabidopsis thaliana | DRE core motif | RCCGAC | -38 | -33 | + | ACCGAC |
| At5g40930 |
Arabidopsis thaliana | DREB1A /CBF3 | RCCGACNT | -38 | -31 | + | ACCGACTT |
| At5g40930 |
Arabidopsis thaliana | TATA-box Motif | TATAAA | -19 | -14 | - | TTTATA |
