MPIC - TOM20 CDD Results

Sequences for all species were analysed by CDD (Marchler-Bauer et al. 2011) using default settings. *Columns are described in the CDD documentation.

Domains	Genes
TOM20_plant	38
TPR superfamily	21
TPR	16
MAS20 superfamily	4
3a0801s04tom	3
F-box	1
NAD_binding_8 superfamily	1
FBD	1
TrkA	1
F-box superfamily	1
TPR_11	1
Porin3_Tom40	1
CTDII superfamily	1
FBD superfamily	1
Porin3 superfamily	1
DUF1823 superfamily	1
MAS20	1

Query	Hit type	PSSM-ID	From	To	E-Value	Bitscore	Accession	Short name	Incomplete	Superfamily
AT1G27390	specific	238112	58	109	0.000518794	36.9744	cd00189	TPR	C	cl19085
AT1G27390	superfamily	238112	58	109	0.000518794	36.9744	cl19085	TPR superfamily	C	-
AT1G27390	multi-dom	191555	8	201	5.06654e-110	316.208	pfam06552	TOM20_plant	-	-
AT3G27070	multi-dom	191555	1	246	5.92911e-84	251.494	pfam06552	TOM20_plant	-	-
AT3G27080	specific	238112	53	148	0.000324157	37.3596	cd00189	TPR	-	cl19085
AT3G27080	superfamily	238112	53	148	0.000324157	37.3596	cl19085	TPR superfamily	-	-
AT3G27080	multi-dom	191555	7	193	8.85449e-116	330.46	pfam06552	TOM20_plant	-	-
AT5G40930	multi-dom	191555	7	179	8.94159e-98	283.851	pfam06552	TOM20_plant	-	-
Bra010946	specific	238112	58	150	0.00108896	35.8188	cd00189	TPR	-	cl19085
Bra010946	superfamily	238112	58	150	0.00108896	35.8188	cl19085	TPR superfamily	-	-
Bra010946	multi-dom	191555	9	199	1.2944e-81	243.79	pfam06552	TOM20_plant	-	-
Bra030044	specific	238112	58	124	5.23159e-05	39.6708	cd00189	TPR	C	cl19085
Bra030044	superfamily	238112	58	124	5.23159e-05	39.6708	cl19085	TPR superfamily	C	-
Bra030044	multi-dom	191555	8	206	1.48315e-78	236.086	pfam06552	TOM20_plant	-	-
Bra032826	multi-dom	191555	8	202	1.88753e-93	274.221	pfam06552	TOM20_plant	-	-
Bra032980	multi-dom	191555	8	190	9.82497e-95	276.918	pfam06552	TOM20_plant	-	-
gi\|17560096	specific	233221	5	141	1.82669e-60	187.433	TIGR00985	3a0801s04tom	-	cl03428
gi\|17560096	superfamily	261736	5	141	1.82669e-60	187.433	cl03428	MAS20 superfamily	-	-
Carubv10005798	multi-dom	191555	8	193	1.63572e-100	291.17	pfam06552	TOM20_plant	-	-
Carubv10018043	multi-dom	191555	7	194	1.41456e-110	317.364	pfam06552	TOM20_plant	-	-
Carubv10018077	multi-dom	191555	1	185	1.79715e-93	273.066	pfam06552	TOM20_plant	-	-
Cucsa.054120.1	multi-dom	191555	8	191	7.29033e-97	282.31	pfam06552	TOM20_plant	-	-
Cucsa.395030.1	specific	238112	54	127	9.36138e-06	42.3672	cd00189	TPR	C	cl19085
Cucsa.395030.1	superfamily	238112	54	127	9.36138e-06	42.3672	cl19085	TPR superfamily	C	-
Cucsa.395030.1	multi-dom	191555	8	227	9.20478e-89	263.05	pfam06552	TOM20_plant	-	-
XP_642798	specific	132766	39	312	1.44524e-63	204.365	cd07305	Porin3_Tom40	-	cl03224
XP_642798	superfamily	261646	39	312	1.44524e-63	204.365	cl03224	Porin3 superfamily	-	-
Eucgr.I01647	multi-dom	191555	7	194	1.40676e-97	284.236	pfam06552	TOM20_plant	-	-
CBJ27905.1\|emb\|gi\|298715256	superfamily	192168	101	225	1.26948e-26	100.846	cl08504	DUF1823 superfamily	-	-
Glyma05g14300.1	specific	238112	54	127	0.00104533	35.8188	cd00189	TPR	C	cl19085
Glyma05g14300.1	superfamily	238112	54	127	0.00104533	35.8188	cl19085	TPR superfamily	C	-
Glyma05g14300.1	multi-dom	191555	8	198	5.36018e-102	295.792	pfam06552	TOM20_plant	-	-
Glyma11g37120.1	superfamily	238112	59	120	0.00224377	35.0484	cl19085	TPR superfamily	C	-
Glyma11g37120.1	multi-dom	191555	8	192	2.76138e-91	268.058	pfam06552	TOM20_plant	-	-
Glyma18g01030.2	superfamily	238112	59	120	0.00285283	34.278	cl19085	TPR superfamily	C	-
Glyma18g01030.2	multi-dom	191555	8	180	9.81978e-89	260.739	pfam06552	TOM20_plant	-	-
Glyma19g17930	multi-dom	191555	1	137	1.33633e-55	174.84	pfam06552	TOM20_plant	N	-
gi\|46409384	specific	251066	24	131	1.58206e-42	139.249	pfam02064	MAS20	-	cl03428
gi\|46409384	superfamily	261736	24	131	1.58206e-42	139.249	cl03428	MAS20 superfamily	-	-
Medtr3g085410	specific	238112	54	133	8.56885e-05	38.9004	cd00189	TPR	C	cl19085
Medtr3g085410	superfamily	238112	54	133	8.56885e-05	38.9004	cl19085	TPR superfamily	C	-
Medtr3g085410	multi-dom	191555	8	194	1.69697e-79	238.012	pfam06552	TOM20_plant	-	-
Medtr3g085420	multi-dom	191555	15	256	2.29467e-22	91.2514	pfam06552	TOM20_plant	-	-
Medtr6g012540	multi-dom	191555	10	124	5.18657e-24	95.1034	pfam06552	TOM20_plant	C	-
Medtr6g044560	specific	214730	487	564	4.31499e-05	41.7463	smart00579	FBD	-	cl11661
Medtr6g044560	superfamily	264463	487	564	4.31499e-05	41.7463	cl11661	FBD superfamily	-	-
Medtr6g044560	specific	250027	178	210	0.00139295	37.1842	pfam00646	F-box	C	cl02535
Medtr6g044560	superfamily	261329	178	210	0.00139295	37.1842	cl02535	F-box superfamily	C	-
Medtr6g044560	superfamily	238112	62	123	0.009423	34.6632	cl19085	TPR superfamily	C	-
Medtr6g044560	multi-dom	257739	30	118	0.00122196	37.2931	pfam13414	TPR_11	-	-
Medtr7g099160	specific	238112	55	128	0.000319116	39.2856	cd00189	TPR	C	cl19085
Medtr7g099160	superfamily	238112	55	128	0.000319116	39.2856	cl19085	TPR superfamily	C	-
Medtr7g099160	superfamily	267487	213	336	3.63059e-08	52.2979	cl19134	NAD_binding_8 superfamily	N	-
Medtr7g099160	multi-dom	224983	209	462	8.39419e-32	126.034	COG2072	TrkA	C	-
gi\|85104848	specific	233221	1	151	4.31826e-49	158.157	TIGR00985	3a0801s04tom	-	cl03428
gi\|85104848	superfamily	261736	1	151	4.31826e-49	158.157	cl03428	MAS20 superfamily	-	-
LOC_Os01g69250	specific	238112	55	121	2.28105e-05	40.8264	cd00189	TPR	C	cl19085
LOC_Os01g69250	superfamily	238112	55	121	2.28105e-05	40.8264	cl19085	TPR superfamily	C	-
LOC_Os01g69250	multi-dom	191555	10	193	7.39651e-80	239.168	pfam06552	TOM20_plant	-	-
Phpat.016G052500	specific	238112	59	133	0.000329848	37.3596	cd00189	TPR	-	cl19085
Phpat.016G052500	superfamily	238112	59	133	0.000329848	37.3596	cl19085	TPR superfamily	-	-
Phpat.016G052500	multi-dom	191555	9	192	4.42049e-81	242.25	pfam06552	TOM20_plant	-	-
Phpat.027G024400	specific	238112	122	196	7.10901e-05	40.056	cd00189	TPR	-	cl19085
Phpat.027G024400	superfamily	238112	122	196	7.10901e-05	40.056	cl19085	TPR superfamily	-	-
Phpat.027G024400	multi-dom	191555	72	256	8.38776e-71	218.367	pfam06552	TOM20_plant	-	-
Potri.001G054900	multi-dom	191555	8	193	7.61327e-99	287.318	pfam06552	TOM20_plant	-	-
Potri.001G330200	multi-dom	191555	7	197	1.0242e-90	266.902	pfam06552	TOM20_plant	-	-
Potri.003G173400	multi-dom	191555	8	192	9.6995e-96	279.229	pfam06552	TOM20_plant	-	-
29929.t000160	superfamily	238112	54	127	0.00639473	33.5076	cl19085	TPR superfamily	C	-
29929.t000160	multi-dom	191555	8	197	2.43121e-96	281.155	pfam06552	TOM20_plant	-	-
30190.t000164	multi-dom	191555	7	196	2.59292e-102	296.178	pfam06552	TOM20_plant	-	-
g13148.t1	specific	238112	46	143	1.50286e-05	41.2116	cd00189	TPR	-	cl19085
g13148.t1	superfamily	238112	46	143	1.50286e-05	41.2116	cl19085	TPR superfamily	-	-
g13148.t1	multi-dom	191555	9	192	8.79801e-44	146.335	pfam06552	TOM20_plant	-	-
YGR082W	specific	233221	1	154	6.64689e-66	201.3	TIGR00985	3a0801s04tom	-	cl03428
YGR082W	superfamily	261736	1	154	6.64689e-66	201.3	cl03428	MAS20 superfamily	-	-
437971	multi-dom	191555	10	198	1.15586e-58	184.855	pfam06552	TOM20_plant	-	-
74372	multi-dom	191555	7	193	5.2583e-70	213.745	pfam06552	TOM20_plant	-	-
PGSC0003DMG400020255	specific	238112	53	123	9.18693e-06	41.982	cd00189	TPR	C	cl19085
PGSC0003DMG400020255	superfamily	238112	53	123	9.18693e-06	41.982	cl19085	TPR superfamily	C	-
PGSC0003DMG400020255	multi-dom	191555	7	193	7.45191e-101	292.711	pfam06552	TOM20_plant	-	-
PGSC0003DMG401022140	multi-dom	191555	1	182	9.41719e-73	220.293	pfam06552	TOM20_plant	-	-
gi\|302850820\|ref\|XP_002956936.1	multi-dom	191555	174	275	1.55714e-11	61.591	pfam06552	TOM20_plant	N	-
GSVIVG01033094001	specific	238112	53	119	0.000446634	36.9744	cd00189	TPR	C	cl19085
GSVIVG01033094001	superfamily	238112	53	119	0.000446634	36.9744	cl19085	TPR superfamily	C	-
GSVIVG01033094001	multi-dom	191555	7	192	1.08641e-106	307.348	pfam06552	TOM20_plant	-	-
GRMZM2G100402	specific	238112	52	125	0.000695934	36.5892	cd00189	TPR	C	cl19085
GRMZM2G100402	superfamily	238112	52	125	0.000695934	36.5892	cl19085	TPR superfamily	C	-
GRMZM2G100402	multi-dom	191555	7	191	9.0161e-78	233.775	pfam06552	TOM20_plant	-	-
GRMZM2G105531_T01	specific	238112	55	128	0.000103101	38.9004	cd00189	TPR	C	cl19085
GRMZM2G105531_T01	superfamily	238112	55	128	0.000103101	38.9004	cl19085	TPR superfamily	C	-
GRMZM2G105531_T01	multi-dom	191555	10	192	5.43639e-77	231.849	pfam06552	TOM20_plant	-	-
GRMZM2G314434_T01	superfamily	250704	56	92	1.85269e-09	49.8703	cl19384	CTDII superfamily	N	-
GRMZM2G314434_T01	superfamily	238112	1	66	0.00913549	31.5816	cl19085	TPR superfamily	-	-

ARC Centre of Excellence for Plant Energy Biology

MPIC — TOM20 CDD Results