MPIC
Putative and known regulatory elements within upstream regions of each gene were obtained from, and enable analysis of co-regulated genes sourced from, Athena: Arabidopsis thaliana a resource for rapid visualization and systematic analysis of Arabidopsis promoter sequences (O’Connor et al. 2005).
| Locus | Species | Motif | Pattern | Start | End | Sense | Sequence |
|---|---|---|---|---|---|---|---|
At3g46560  |
Arabidopsis thaliana | ARF binding site motif | TGTCTC | -597 | -592 | - | GAGACA |
| At3g46560 |
Arabidopsis thaliana | AtMYC2 BS in RD22 | CACATG | -361 | -356 | - | CATGTG |
| At3g46560 |
Arabidopsis thaliana | CACGTGMOTIF | CACGTG | -411 | -406 | + | CACGTG |
| At3g46560 |
Arabidopsis thaliana | CACGTGMOTIF | CACGTG | -411 | -406 | - | CACGTG |
| At3g46560 |
Arabidopsis thaliana | CCA1 binding site motif | AAMAATCT | -248 | -241 | - | AGATTGTT |
| At3g46560 |
Arabidopsis thaliana | CCA1 motif1 BS in CAB1 | AAACAATCTA | -249 | -240 | - | TAGATTGTTT |
| At3g46560 |
Arabidopsis thaliana | GBF1 /2 /3 BS in ADH1 | CCACGTGG | -412 | -405 | + | CCACGTGG |
| At3g46560 |
Arabidopsis thaliana | GBF1 /2 /3 BS in ADH1 | CCACGTGG | -412 | -405 | - | CCACGTGG |
| At3g46560 |
Arabidopsis thaliana | Ibox promoter motif | GATAAG | -175 | -170 | + | GATAAG |
| At3g46560 |
Arabidopsis thaliana | MYB binding site promoter | MACCWAMC | -621 | -614 | - | GTTTGGTG |
| At3g46560 |
Arabidopsis thaliana | MYB1AT | WAACCA | -164 | -159 | + | TAACCA |
| At3g46560 |
Arabidopsis thaliana | MYB4 binding site motif | AMCWAMC | -621 | -615 | - | GTTTGGT |
| At3g46560 |
Arabidopsis thaliana | MYB4 binding site motif | AMCWAMC | -702 | -696 | - | GTTAGGT |
| At3g46560 |
Arabidopsis thaliana | MYCATERD1 | CATGTG | -361 | -356 | + | CATGTG |
| At3g46560 |
Arabidopsis thaliana | SV40 core promoter motif | GTGGWWHG | -655 | -648 | + | GTGGATAG |
