ARC Centre of Excellence for Plant Energy Biology

MPIC — TIM50 Transmembrane Helix Domain Predictions

Num_PredHel indicates the number of predicted transmembrane helix domains calculated by DAS and TMHMM predictors (for methods, see MPIC paper). A tally of both predictors is shown first.

Num_PredHel Frequency
1 22
2 1

1 predicted Species DAS_Num_PredHelTMHMM_Num_PredHel
AT1G55900 Species Arabidopsis thaliana Arabidopsis thaliana 1
Bra030827 Species Brassica rapa Brassica rapa 1
Bra037095 Species Brassica rapa Brassica rapa
gi|74966225 Species Caenorhabditis elegans Caenorhabditis elegans 11
CMN179CT Species Cyanidioschyzon merolae Cyanidioschyzon merolae 11
Cre12.g505950.t1.2 Species Chlamydomonas reinhardtii Chlamydomonas reinhardtii
Carubv10009325m.g Species Capsella rubella Capsella rubella 1
Cucsa.390900.1 Species Cucumis sativus Cucumis sativus 11
Q55C70|sp Species Dictyostelium discoideum Dictyostelium discoideum 11
Eucgr.F02057.1 Species Eucalyptus grandis Eucalyptus grandis
Esi0000_0471 Species Ectocarpus siliculosus Ectocarpus siliculosus
Glyma02g46900.1 Species Glycine max Glycine max
Glyma14g01810.1 Species Glycine max Glycine max
gi|48526509 Species Homo sapiens Homo sapiens 1
Medtr5g095530.1 Species Medicago truncatula Medicago truncatula
gi|164427612 Species Neurospora crassa Neurospora crassa 11
LOC_Os01g55700.1 Species Oryza sativa Oryza sativa 1
LOC_Os05g43770.1 Species Oryza sativa Oryza sativa 1
Phpat.008G082000.1 Species Physcomitrella patens Physcomitrella patens
Phpat.020G041400.1 Species Physcomitrella patens Physcomitrella patens
Potri.001G364500.1 Species Populus trichocarpa Populus trichocarpa
Potri.001G366300.1 Species Populus trichocarpa Populus trichocarpa
Potri.004G062900 Species Populus trichocarpa Populus trichocarpa
Potri.011G072000 Species Populus trichocarpa Populus trichocarpa
Potri.011G093000 Species Populus trichocarpa Populus trichocarpa 1
29629.m001396|29629.t000047 Species Ricinus communis Ricinus communis 21
30026.m001487|30026.t000051 Species Ricinus communis Ricinus communis
YPL063W Species Saccharomyces cerevisiae Saccharomyces cerevisiae
124475 Species Selaginella moellendorffii Selaginella moellendorffii
77112 Species Selaginella moellendorffii Selaginella moellendorffii
PGSC0003DMG400022178|PGSC0003DMT400057084 Species Solanum tuberosum Solanum tuberosum
PGSC0003DMG400022178|PGSC0003DMT400057087 Species Solanum tuberosum Solanum tuberosum
Vocar20000934 Species Volvox carteri Volvox carteri
GSVIVG01014657001|GSVIVT01014657001 Species Vitis vinifera Vitis vinifera 11
GSVIVG01030074001|GSVIVT01030074001 Species Vitis vinifera Vitis vinifera
GRMZM2G035651_T01 Species Zea mays Zea mays 11
GRMZM2G441091_T01 Species Zea mays Zea mays
GRMZM5G896568_T01 Species Zea mays Zea mays

Sequences (FASTA)