ARC Centre of Excellence for Plant Energy Biology

MPIC — TIM50 Athena Promoter Motif Predictions

Putative and known regulatory elements within upstream regions of each gene were obtained from, and enable analysis of co-regulated genes sourced from, Athena: Arabidopsis thaliana a resource for rapid visualization and systematic analysis of Arabidopsis promoter sequences (O’Connor et al. 2005).

Locus Species Motif Pattern Start End Sense Sequence
At1g55900 Species Arabidopsis thaliana Arabidopsis thaliana CARGCW8GATCWWWWWWWWG-186-177+CATTAATTAG
At1g55900 Species Arabidopsis thaliana Arabidopsis thaliana CARGCW8GATCWWWWWWWWG-186-177-CATTAATTAG
At1g55900 Species Arabidopsis thaliana Arabidopsis thaliana DRE core motifRCCGAC-71-66+ACCGAC
At1g55900 Species Arabidopsis thaliana Arabidopsis thaliana Ibox promoter motifGATAAG-53-48+GATAAG
At1g55900 Species Arabidopsis thaliana Arabidopsis thaliana MYB4 binding site motifAMCWAMC-64-58+ACCAAAC

Sequences (FASTA)