ARC Centre of Excellence for Plant Energy Biology

MPIC — TIM50 – LOC_Os01g55700.1 InterPro Results

Sequences for Oryza sativa were analysed by InterPro (Zdobnov and Apweiler 2001) using default settings.

Database Detected Description Start End E-Value
InterPro IPR004274 NLI interacting factor:
Pfam PF03031 NLI interacting factor-like phosphatase 177 322 5.8E-37
ProSiteProfiles PS50969 FCP1 homology domain profile. 171 314 0.0
SMART SM00577 catalytic domain of ctd-like phosphatases 174 302 2.100002678E-46
InterPro IPR023214 HAD-like domain:
Gene3D G3DSA:3.40.50.1000 169 327 5.1E-39
SUPERFAMILY SSF56784 163 327 0.0
InterPro IPR027111 Mitochondrial import inner membrane translocase subunit Tim50:
PANTHER PTHR12210:SF3 121 355 0.0
InterPro No IPR Unintegrated signatures:
PANTHER PTHR12210 121 355 0.0
Phobius CYTOPLASMIC_DOMAIN Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. 1 74 -
Phobius NON_CYTOPLASMIC_DOMAIN Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. 94 361 -
Phobius TRANSMEMBRANE Region of a membrane-bound protein predicted to be embedded in the membrane. 75 93 -
SignalP_GRAM_POSITIVE SignalP-TM 1 34 -

InterPro
Clickable SVG
Courtesy of EMBL-EBI

Sequences (FASTA)