MPIC
Putative and known regulatory elements within upstream regions of each gene were obtained from, and enable analysis of co-regulated genes sourced from, Athena: Arabidopsis thaliana a resource for rapid visualization and systematic analysis of Arabidopsis promoter sequences (O’Connor et al. 2005).
| Locus | Species | Motif | Pattern | Start | End | Sense | Sequence |
|---|---|---|---|---|---|---|---|
At1g17530  |
Arabidopsis thaliana | BoxII promoter motif | GGTTAA | -86 | -81 | + | GGTTAA |
| At1g17530 |
Arabidopsis thaliana | CARGCW8GAT | CWWWWWWWWG | -218 | -209 | + | CTTTTATATG |
| At1g17530 |
Arabidopsis thaliana | CARGCW8GAT | CWWWWWWWWG | -218 | -209 | - | CTTTTATATG |
| At1g17530 |
Arabidopsis thaliana | MYB1 binding site motif | MTCCWACC | -177 | -170 | - | GGTAGGAT |
| At1g17530 |
Arabidopsis thaliana | MYB4 binding site motif | AMCWAMC | -186 | -180 | - | GGTTGTT |
| At1g17530 |
Arabidopsis thaliana | TATA-box Motif | TATAAA | -216 | -211 | - | TTTATA |
| At1g17530 |
Arabidopsis thaliana | W-box promoter motif | TTGACY | -57 | -52 | - | GGTCAA |
| At1g72750 |
Arabidopsis thaliana | BoxII promoter motif | GGTTAA | -179 | -174 | + | GGTTAA |
| At1g72750 |
Arabidopsis thaliana | BoxII promoter motif | GGTTAA | -64 | -59 | + | GGTTAA |
| At1g72750 |
Arabidopsis thaliana | LEAFYATAG | CCAATGT | -192 | -186 | + | CCAATGT |
| At1g72750 |
Arabidopsis thaliana | MYB binding site promoter | MACCWAMC | -251 | -244 | - | GTTTGGTT |
| At1g72750 |
Arabidopsis thaliana | MYB1AT | WAACCA | -104 | -99 | + | AAACCA |
| At1g72750 |
Arabidopsis thaliana | MYB4 binding site motif | AMCWAMC | -251 | -245 | - | GTTTGGT |
| At1g72750 |
Arabidopsis thaliana | RAV1-B binding site motif | CACCTG | -270 | -265 | + | CACCTG |
| At1g72750 |
Arabidopsis thaliana | SV40 core promoter motif | GTGGWWHG | -115 | -108 | + | GTGGTAAG |
| At1g72750 |
Arabidopsis thaliana | T-box promoter motif | ACTTTG | -204 | -199 | + | ACTTTG |
| At1g72750 |
Arabidopsis thaliana | T-box promoter motif | ACTTTG | -221 | -216 | - | CAAAGT |
| At1g72750 |
Arabidopsis thaliana | W-box promoter motif | TTGACY | -420 | -415 | + | TTGACT |
| At3g04800 |
Arabidopsis thaliana | BoxII promoter motif | GGTTAA | -272 | -267 | - | TTAACC |
| At3g04800 |
Arabidopsis thaliana | CARGCW8GAT | CWWWWWWWWG | -687 | -678 | + | CAAATTATAG |
| At3g04800 |
Arabidopsis thaliana | CARGCW8GAT | CWWWWWWWWG | -687 | -678 | - | CAAATTATAG |
| At3g04800 |
Arabidopsis thaliana | GAREAT | TAACAAR | -855 | -849 | - | TTTGTTA |
| At3g04800 |
Arabidopsis thaliana | MYB1AT | WAACCA | -733 | -728 | + | TAACCA |
| At3g04800 |
Arabidopsis thaliana | MYB1LEPR | GTTAGTT | -391 | -385 | - | AACTAAC |
| At3g04800 |
Arabidopsis thaliana | MYB3 binding site motif | TAACTAAC | -392 | -385 | + | TAACTAAC |
| At3g04800 |
Arabidopsis thaliana | MYB4 binding site motif | AMCWAMC | -382 | -376 | - | GTTAGGT |
| At3g04800 |
Arabidopsis thaliana | MYB4 binding site motif | AMCWAMC | -391 | -385 | + | AACTAAC |
| At3g04800 |
Arabidopsis thaliana | MYB4 binding site motif | AMCWAMC | -494 | -488 | - | GTTTGTT |
| At3g04800 |
Arabidopsis thaliana | T-box promoter motif | ACTTTG | -355 | -350 | + | ACTTTG |
| At3g04800 |
Arabidopsis thaliana | T-box promoter motif | ACTTTG | -658 | -653 | + | ACTTTG |
| At3g04800 |
Arabidopsis thaliana | TATA-box Motif | TATAAA | -486 | -481 | - | TTTATA |
| At3g04800 |
Arabidopsis thaliana | TATA-box Motif | TATAAA | -63 | -58 | + | TATAAA |
| At3g04800 |
Arabidopsis thaliana | TATA-box Motif | TATAAA | -700 | -695 | + | TATAAA |
| At3g04800 |
Arabidopsis thaliana | TATA-box Motif | TATAAA | -702 | -697 | - | TTTATA |
| At3g04800 |
Arabidopsis thaliana | TATA-box Motif | TATAAA | -893 | -888 | - | TTTATA |
| At3g04800 |
Arabidopsis thaliana | TATA-box Motif | TATAAA | -930 | -925 | + | TATAAA |
| At3g04800 |
Arabidopsis thaliana | TELO-box promoter motif | AAACCCTAA | -39 | -31 | + | AAACCCTAA |
| At3g04800 |
Arabidopsis thaliana | W-box promoter motif | TTGACY | -312 | -307 | + | TTGACC |
| At3g04800 |
Arabidopsis thaliana | W-box promoter motif | TTGACY | -352 | -347 | + | TTGACC |
| At3g04800 |
Arabidopsis thaliana | W-box promoter motif | TTGACY | -76 | -71 | + | TTGACT |
| At3g04800 |
Arabidopsis thaliana | W-box promoter motif | TTGACY | -938 | -933 | + | TTGACC |
