ARC Centre of Excellence for Plant Energy Biology

MPIC — TIM22 Transmembrane Helix Domain Predictions

Num_PredHel indicates the number of predicted transmembrane helix domains calculated by DAS and TMHMM predictors (for methods, see MPIC paper). A tally of both predictors is shown first.

Num_PredHel Frequency
1 24
2 13
3 10

1 predicted Species DAS_Num_PredHelTMHMM_Num_PredHel
AT1g18320 Species Arabidopsis thaliana Arabidopsis thaliana 2
AT3G10110 Species Arabidopsis thaliana Arabidopsis thaliana 3
Bra016560 Species Brassica rapa Brassica rapa 3
Bra031026 Species Brassica rapa Brassica rapa 3
gi|17532463 Species Caenorhabditis elegans Caenorhabditis elegans 32
CMS209CT Species Cyanidioschyzon merolae Cyanidioschyzon merolae 11
Cre01.g021050 Species Chlamydomonas reinhardtii Chlamydomonas reinhardtii 1
Carubv10010466 Species Capsella rubella Capsella rubella 2
Cucsa.151920 Species Cucumis sativus Cucumis sativus 3
gi|66810255 Species Dictyostelium discoideum Dictyostelium discoideum 22
Eucgr.K02762 Species Eucalyptus grandis Eucalyptus grandis 31
Esi0063_0018 Species Ectocarpus siliculosus Ectocarpus siliculosus 11
Glyma09g35780 Species Glycine max Glycine max 21
Glyma12g01980 Species Glycine max Glycine max 21
gi|56606061 Species Homo sapiens Homo sapiens 12
Medtr4g077950 Species Medicago truncatula Medicago truncatula 21
Medtr4g078050.1 Species Medicago truncatula Medicago truncatula 31
gi|164426913 Ncrassa Species Neurospora crassa Neurospora crassa 31
LOC_Os03g18500 Species Oryza sativa Oryza sativa 2
Phpat.012G063000 Species Physcomitrella patens Physcomitrella patens 11
Potri.001G281200 Species Populus trichocarpa Populus trichocarpa 21
Potri.009G076400 Species Populus trichocarpa Populus trichocarpa 31
30209.m001533|30209.t000032 Species Ricinus communis Ricinus communis 1
YDL217C Species Saccharomyces cerevisiae Saccharomyces cerevisiae 12
230551 Species Selaginella moellendorffii Selaginella moellendorffii 2
PGSC0003DMG402019636 Species Solanum tuberosum Solanum tuberosum 11
Vocar20010161 Species Volvox carteri Volvox carteri 1
GSVIVG01024670001 Species Vitis vinifera Vitis vinifera 3
GRMZM2G007080 Species Zea mays Zea mays 11
GRMZM2G357152 Species Zea mays Zea mays 1

Sequences (FASTA)