ARC Centre of Excellence for Plant Energy Biology

MPIC — TIM22 Athena Promoter Motif Predictions

Putative and known regulatory elements within upstream regions of each gene were obtained from, and enable analysis of co-regulated genes sourced from, Athena: Arabidopsis thaliana a resource for rapid visualization and systematic analysis of Arabidopsis promoter sequences (O’Connor et al. 2005).

Locus Species Motif Pattern Start End Sense Sequence
At1g18320 Species Arabidopsis thaliana Arabidopsis thaliana ABFs binding site motifCACGTGGC-361-354+CACGTGGC
At1g18320 Species Arabidopsis thaliana Arabidopsis thaliana ABFs binding site motifCACGTGGC-363-356-GCCACGTG
At1g18320 Species Arabidopsis thaliana Arabidopsis thaliana ABRE binding site motifYACGTGGC-361-354+CACGTGGC
At1g18320 Species Arabidopsis thaliana Arabidopsis thaliana ABRE binding site motifYACGTGGC-363-356-GCCACGTG
At1g18320 Species Arabidopsis thaliana Arabidopsis thaliana ABRE-like binding site motifBACGTGKM-361-354+CACGTGGC
At1g18320 Species Arabidopsis thaliana Arabidopsis thaliana ABRE-like binding site motifBACGTGKM-363-356-GCCACGTG
At1g18320 Species Arabidopsis thaliana Arabidopsis thaliana ACGTABREMOTIFA2OSEMACGTGKC-360-354+ACGTGGC
At1g18320 Species Arabidopsis thaliana Arabidopsis thaliana ACGTABREMOTIFA2OSEMACGTGKC-363-357-GCCACGT
At1g18320 Species Arabidopsis thaliana Arabidopsis thaliana BoxII promoter motifGGTTAA-104-99-TTAACC
At1g18320 Species Arabidopsis thaliana Arabidopsis thaliana CACGTGMOTIFCACGTG-361-356+CACGTG
At1g18320 Species Arabidopsis thaliana Arabidopsis thaliana CACGTGMOTIFCACGTG-361-356-CACGTG
At1g18320 Species Arabidopsis thaliana Arabidopsis thaliana GBF1 /2 /3 BS in ADH1CCACGTGG-362-355+CCACGTGG
At1g18320 Species Arabidopsis thaliana Arabidopsis thaliana GBF1 /2 /3 BS in ADH1CCACGTGG-362-355-CCACGTGG
At1g18320 Species Arabidopsis thaliana Arabidopsis thaliana GBOXLERBCSMCACGTGGC-362-354+CCACGTGGC
At1g18320 Species Arabidopsis thaliana Arabidopsis thaliana GBOXLERBCSMCACGTGGC-363-355-GCCACGTGG
At1g18320 Species Arabidopsis thaliana Arabidopsis thaliana MYB1ATWAACCA-510-505-TGGTTT
At1g18320 Species Arabidopsis thaliana Arabidopsis thaliana MYB4 binding site motifAMCWAMC-467-461-GGTTGTT
At1g18320 Species Arabidopsis thaliana Arabidopsis thaliana MYB4 binding site motifAMCWAMC-66-60+AACAACC
At3g10110 Species Arabidopsis thaliana Arabidopsis thaliana ACGTABREMOTIFA2OSEMACGTGKC-199-193+ACGTGGC
At3g10110 Species Arabidopsis thaliana Arabidopsis thaliana DRE core motifRCCGAC-327-322-GTCGGC
At3g10110 Species Arabidopsis thaliana Arabidopsis thaliana DRE core motifRCCGAC-454-449+GCCGAC
At3g10110 Species Arabidopsis thaliana Arabidopsis thaliana DREB1A /CBF3RCCGACNT-329-322-AGGTCGGC
At3g10110 Species Arabidopsis thaliana Arabidopsis thaliana DREB1A /CBF3RCCGACNT-454-447+GCCGACTT
At3g10110 Species Arabidopsis thaliana Arabidopsis thaliana MYB4 binding site motifAMCWAMC-304-298-GGTTGTT
At3g10110 Species Arabidopsis thaliana Arabidopsis thaliana MYB4 binding site motifAMCWAMC-392-386-GTTTGGT
At3g10110 Species Arabidopsis thaliana Arabidopsis thaliana MYB4 binding site motifAMCWAMC-672-666+AACAAAC
At3g10110 Species Arabidopsis thaliana Arabidopsis thaliana T-box promoter motifACTTTG-450-445+ACTTTG

Sequences (FASTA)