ARC Centre of Excellence for Plant Energy Biology

MPIC — TIM22 CDD Results

Sequences for all species were analysed by CDD (Marchler-Bauer et al. 2011) using default settings. *Columns are described in the CDD documentation.

Domains Genes
Tim17 superfamily 30
Tim17 29
TIM22 1
QueryHit typePSSM-IDFromToE-ValueBitscoreAccessionShort nameIncompleteSuperfamily
AT1g18320 Species Arabidopsis thalianaspecific217053761681.99379e-29106.192pfam02466Tim17Ncl02381
AT1g18320 Species Arabidopsis thalianasuperfamily243015761681.99379e-29106.192cl02381Tim17 superfamilyN -
AT3G10110 Species Arabidopsis thalianaspecific217053761681.99379e-29106.192pfam02466Tim17Ncl02381
AT3G10110 Species Arabidopsis thalianasuperfamily243015761681.99379e-29106.192cl02381Tim17 superfamilyN -
Bra016560 Species Brassica rapaspecific217053721649.43451e-31109.659pfam02466Tim17Ncl02381
Bra016560 Species Brassica rapasuperfamily243015721649.43451e-31109.659cl02381Tim17 superfamilyN -
Bra031026 Species Brassica rapaspecific217053761632.65021e-27100.414pfam02466Tim17Ncl02381
Bra031026 Species Brassica rapasuperfamily243015761632.65021e-27100.414cl02381Tim17 superfamilyN -
gi|17532463 Species Caenorhabditis elegansspecific2170531162121.42726e-27102.725pfam02466Tim17Ncl02381
gi|17532463 Species Caenorhabditis eleganssuperfamily2430151162121.42726e-27102.725cl02381Tim17 superfamilyN -
CMS209CT Species Cyanidioschyzon merolaespecific217053751773.48472e-2390.0138pfam02466Tim17Ncl02381
CMS209CT Species Cyanidioschyzon merolaesuperfamily243015751773.48472e-2390.0138cl02381Tim17 superfamilyN -
Cre01.g021050 Species Chlamydomonas reinhardtiispecific217053571892.52325e-2493.4806pfam02466Tim17 - cl02381
Cre01.g021050 Species Chlamydomonas reinhardtiisuperfamily243015571892.52325e-2493.4806cl02381Tim17 superfamily - -
Carubv10010466 Species Capsella rubellaspecific217053801671.10174e-28104.266pfam02466Tim17Ncl02381
Carubv10010466 Species Capsella rubellasuperfamily243015801671.10174e-28104.266cl02381Tim17 superfamilyN -
Cucsa.151920 Species Cucumis sativusspecific2170531151791.07789e-1981.5394pfam02466Tim17NCcl02381
Cucsa.151920 Species Cucumis sativussuperfamily2430151151791.07789e-1981.5394cl02381Tim17 superfamilyNC -
gi|66810255 Species Dictyostelium discoideumspecific217053881783.37282e-1876.5318pfam02466Tim17Ncl02381
gi|66810255 Species Dictyostelium discoideumsuperfamily243015881783.37282e-1876.5318cl02381Tim17 superfamilyN -
Eucgr.K02762 Species Eucalyptus grandisspecific217053791663.07964e-2390.0138pfam02466Tim17Ncl02381
Eucgr.K02762 Species Eucalyptus grandissuperfamily243015791663.07964e-2390.0138cl02381Tim17 superfamilyN -
Esi0063_0018 Species Ectocarpus siliculosusspecific217053591907.55973e-31110.815pfam02466Tim17 - cl02381
Esi0063_0018 Species Ectocarpus siliculosussuperfamily243015591907.55973e-31110.815cl02381Tim17 superfamily - -
Glyma09g35780 Species Glycine maxspecific217053681654.51312e-2184.2358pfam02466Tim17Ncl02381
Glyma09g35780 Species Glycine maxsuperfamily243015681654.51312e-2184.2358cl02381Tim17 superfamilyN -
Glyma12g01980 Species Glycine maxspecific217053681656.14079e-2183.8506pfam02466Tim17Ncl02381
Glyma12g01980 Species Glycine maxsuperfamily243015681656.14079e-2183.8506cl02381Tim17 superfamilyN -
gi|56606061 Species Homo sapiensspecific2170531091731.30362e-2288.8582pfam02466Tim17Ncl02381
gi|56606061 Species Homo sapienssuperfamily2430151091731.30362e-2288.8582cl02381Tim17 superfamilyN -
Medtr4g077950 Species Medicago truncatulaspecific217053731657.71434e-2696.9474pfam02466Tim17Ncl02381
Medtr4g077950 Species Medicago truncatulasuperfamily243015731657.71434e-2696.9474cl02381Tim17 superfamilyN -
Medtr4g078050.1 Species Medicago truncatulaspecific217053731657.71434e-2696.9474pfam02466Tim17Ncl02381
Medtr4g078050.1 Species Medicago truncatulasuperfamily243015731657.71434e-2696.9474cl02381Tim17 superfamilyN -
gi|164426913 Ncrassa Species Neurospora crassaspecific2170531362051.57709e-2392.325pfam02466Tim17Ncl02381
gi|164426913 Ncrassa Species Neurospora crassasuperfamily2430151362051.57709e-2392.325cl02381Tim17 superfamilyN -
LOC_Os03g18500 Species Oryza sativaspecific217053701624.85869e-2286.547pfam02466Tim17Ncl02381
LOC_Os03g18500 Species Oryza sativasuperfamily243015701624.85869e-2286.547cl02381Tim17 superfamilyN -
Phpat.012G063000 Species Physcomitrella patensspecific217053681559.37242e-1772.2946pfam02466Tim17Ncl02381
Phpat.012G063000 Species Physcomitrella patenssuperfamily243015681559.37242e-1772.2946cl02381Tim17 superfamilyN -
Potri.001G281200 Species Populus trichocarpaspecific217053821521.7858e-1979.6134pfam02466Tim17NCcl02381
Potri.001G281200 Species Populus trichocarpasuperfamily243015821521.7858e-1979.6134cl02381Tim17 superfamilyNC -
Potri.009G076400 Species Populus trichocarpaspecific217053831503.44413e-1773.8354pfam02466Tim17NCcl02381
Potri.009G076400 Species Populus trichocarpasuperfamily243015831503.44413e-1773.8354cl02381Tim17 superfamilyNC -
30209.m001533|30209.t000032 Species Ricinus communisspecific217053781425.98083e-2183.8506pfam02466Tim17NCcl02381
30209.m001533|30209.t000032 Species Ricinus communissuperfamily243015781425.98083e-2183.8506cl02381Tim17 superfamilyNC -
YDL217C Species Saccharomyces cerevisiaespecific22788311971.01212e-59187.756COG5596TIM22 - cl02381
YDL217C Species Saccharomyces cerevisiaesuperfamily24301511971.01212e-59187.756cl02381Tim17 superfamily - -
230551 Species Selaginella moellendorffiispecific217053731642.07724e-1979.6134pfam02466Tim17Ncl02381
230551 Species Selaginella moellendorffiisuperfamily243015731642.07724e-1979.6134cl02381Tim17 superfamilyN -
PGSC0003DMG402019636 Species Solanum tuberosumspecific217053721645.28883e-33115.437pfam02466Tim17Ncl02381
PGSC0003DMG402019636 Species Solanum tuberosumsuperfamily243015721645.28883e-33115.437cl02381Tim17 superfamilyN -
Vocar20010161 Species Volvox carterispecific217053861891.69565e-2493.8658pfam02466Tim17 - cl02381
Vocar20010161 Species Volvox carterisuperfamily243015861891.69565e-2493.8658cl02381Tim17 superfamily - -
GSVIVG01024670001 Species Vitis viniferaspecific217053731652.70942e-30108.503pfam02466Tim17Ncl02381
GSVIVG01024670001 Species Vitis viniferasuperfamily243015731652.70942e-30108.503cl02381Tim17 superfamilyN -
GRMZM2G007080 Species Zea maysspecific217053781656.87858e-2696.9474pfam02466Tim17Ncl02381
GRMZM2G007080 Species Zea mayssuperfamily243015781656.87858e-2696.9474cl02381Tim17 superfamilyN -
GRMZM2G357152 Species Zea maysspecific217053281152.48703e-2080.3838pfam02466Tim17Ncl02381
GRMZM2G357152 Species Zea mayssuperfamily243015281152.48703e-2080.3838cl02381Tim17 superfamilyN -

Sequences (FASTA)