ARC Centre of Excellence for Plant Energy Biology

MPIC — TIM21,TIM21-LIKE-1,TIM21-LIKE-2 Athena Promoter Motif Predictions

Putative and known regulatory elements within upstream regions of each gene were obtained from, and enable analysis of co-regulated genes sourced from, Athena: Arabidopsis thaliana a resource for rapid visualization and systematic analysis of Arabidopsis promoter sequences (O’Connor et al. 2005).

Locus Species Motif Pattern Start End Sense Sequence
At2g40800 Species Arabidopsis thaliana Arabidopsis thaliana ARF binding site motifTGTCTC-166-161-GAGACA
At2g40800 Species Arabidopsis thaliana Arabidopsis thaliana ARF binding site motifTGTCTC-258-253-GAGACA
At2g40800 Species Arabidopsis thaliana Arabidopsis thaliana CARGCW8GATCWWWWWWWWG-999-990+CATATAATTG
At2g40800 Species Arabidopsis thaliana Arabidopsis thaliana CARGCW8GATCWWWWWWWWG-999-990-CATATAATTG
At2g40800 Species Arabidopsis thaliana Arabidopsis thaliana CCA1 binding site motifAAMAATCT-333-326-AGATTTTT
At2g40800 Species Arabidopsis thaliana Arabidopsis thaliana DRE core motifRCCGAC-204-199+ACCGAC
At2g40800 Species Arabidopsis thaliana Arabidopsis thaliana GAREATTAACAAR-489-483-CTTGTTA
At2g40800 Species Arabidopsis thaliana Arabidopsis thaliana MYB1ATWAACCA-524-519-TGGTTT
At2g40800 Species Arabidopsis thaliana Arabidopsis thaliana MYB4 binding site motifAMCWAMC-422-416+AACAAAC
At2g40800 Species Arabidopsis thaliana Arabidopsis thaliana MYB4 binding site motifAMCWAMC-565-559-GTTTGTT
At2g40800 Species Arabidopsis thaliana Arabidopsis thaliana T-box promoter motifACTTTG-198-193-CAAAGT
At2g40800 Species Arabidopsis thaliana Arabidopsis thaliana W-box promoter motifTTGACY-798-793+TTGACT
At3g56430 Species Arabidopsis thaliana Arabidopsis thaliana CARGCW8GATCWWWWWWWWG-172-163+CAAAATAAAG
At3g56430 Species Arabidopsis thaliana Arabidopsis thaliana CARGCW8GATCWWWWWWWWG-172-163-CAAAATAAAG

Sequences (FASTA)