ARC Centre of Excellence for Plant Energy Biology

MPIC — TIM17 Transmembrane Helix Domain Predictions

Num_PredHel indicates the number of predicted transmembrane helix domains calculated by DAS and TMHMM predictors (for methods, see MPIC paper). A tally of both predictors is shown first.

Num_PredHel Frequency
1 19
2 23
3 11
4 4

2 predicted Species DAS_Num_PredHelTMHMM_Num_PredHel
AT1G20350 Species Arabidopsis thaliana Arabidopsis thaliana 1
AT2G37410 Species Arabidopsis thaliana Arabidopsis thaliana 1
AT5G11690 Species Arabidopsis thaliana Arabidopsis thaliana 23
Bra005199 Species Brassica rapa Brassica rapa 23
Bra006109 Species Brassica rapa Brassica rapa 22
Bra016467 Species Brassica rapa Brassica rapa 2
Bra016468 Species Brassica rapa Brassica rapa 1
Bra016469 Species Brassica rapa Brassica rapa 1
Bra030980 Species Brassica rapa Brassica rapa 21
gi|17539600 Species Caenorhabditis elegans Caenorhabditis elegans 24
gi|392899672 Species Caenorhabditis elegans Caenorhabditis elegans
CMS471CT Species Cyanidioschyzon merolae Cyanidioschyzon merolae 1
Cre10.g452650.t1.2 Species Chlamydomonas reinhardtii Chlamydomonas reinhardtii 3
Carubv10002239m.g Species Capsella rubella Capsella rubella 22
Carubv10010213m.g Species Capsella rubella Capsella rubella 2
Carubv10023975m.g Species Capsella rubella Capsella rubella 1
Cucsa.116650.1 Species Cucumis sativus Cucumis sativus 13
Cucsa.288810.1 Species Cucumis sativus Cucumis sativus 1
gi|66806813 Species Dictyostelium discoideum Dictyostelium discoideum 43
Esi0117_0080 Species Ectocarpus siliculosus Ectocarpus siliculosus 32
Glyma01g01110.1 Species Glycine max Glycine max 1
Glyma16g08520.2 Species Glycine max Glycine max 2
Glyma20g02120.1 Species Glycine max Glycine max 1
gi|269784613 Species Homo sapiens Homo sapiens 41
gi|5454120 Species Homo sapiens Homo sapiens 21
medicago|tim17 contig_66276:1037..2036- Species Medicago truncatula Medicago truncatula 2
gi|85095902 Species Neurospora crassa Neurospora crassa 24
LOC_Os03g30200.1 Species Oryza sativa Oryza sativa 1
LOC_Os03g30220.1 Species Oryza sativa Oryza sativa
LOC_Os05g07250.1 Species Oryza sativa Oryza sativa 1
LOC_Os07g41330.1 Species Oryza sativa Oryza sativa 2
Phpat.019G021000.1 Species Physcomitrella patens Physcomitrella patens 2
Potri.006G165000.1 Species Populus trichocarpa Populus trichocarpa 2
Potri.008G176500.1 Species Populus trichocarpa Populus trichocarpa 2
Potri.018G087900.1 Species Populus trichocarpa Populus trichocarpa 2
29912.m005433|29912.t000159 Species Ricinus communis Ricinus communis 13
YJL143W Species Saccharomyces cerevisiae Saccharomyces cerevisiae 33
89766 Species Selaginella moellendorffii Selaginella moellendorffii 3
PGSC0003DMG400030451|PGSC0003DMT400078245 Species Solanum tuberosum Solanum tuberosum 2
Vocar20010628m.g Species Volvox carteri Volvox carteri 3
GSVIVG01015301001|GSVIVT01015301001 Species Vitis vinifera Vitis vinifera 2
GRMZM2G167463_T01 Species Zea mays Zea mays 1
GRMZM2G321404_T01 Species Zea mays Zea mays 2
GRMZM2G437270_T01 Species Zea mays Zea mays 11

Sequences (FASTA)