ARC Centre of Excellence for Plant Energy Biology

MPIC — TIM17 Athena Promoter Motif Predictions

Putative and known regulatory elements within upstream regions of each gene were obtained from, and enable analysis of co-regulated genes sourced from, Athena: Arabidopsis thaliana a resource for rapid visualization and systematic analysis of Arabidopsis promoter sequences (O’Connor et al. 2005).

Locus Species Motif Pattern Start End Sense Sequence
At1g20350 Species Arabidopsis thaliana Arabidopsis thaliana ABRE-like binding site motifBACGTGKM-183-176+GACGTGGC
At1g20350 Species Arabidopsis thaliana Arabidopsis thaliana ACGTABREMOTIFA2OSEMACGTGKC-182-176+ACGTGGC
At1g20350 Species Arabidopsis thaliana Arabidopsis thaliana Ibox promoter motifGATAAG-199-194+GATAAG
At1g20350 Species Arabidopsis thaliana Arabidopsis thaliana TATA-box MotifTATAAA-172-167-TTTATA
At1g20350 Species Arabidopsis thaliana Arabidopsis thaliana TATA-box MotifTATAAA-290-285+TATAAA
At1g20350 Species Arabidopsis thaliana Arabidopsis thaliana TGA1 binding site motifTGACGTGG-184-177+TGACGTGG
At1g20350 Species Arabidopsis thaliana Arabidopsis thaliana UPRMOTIFIATCCACGTCA-184-177-TGACGTGG
At1g20350 Species Arabidopsis thaliana Arabidopsis thaliana W-box promoter motifTTGACY-111-106-GGTCAA
At1g20350 Species Arabidopsis thaliana Arabidopsis thaliana W-box promoter motifTTGACY-119-114+TTGACC
At2g37410 Species Arabidopsis thaliana Arabidopsis thaliana CARGCW8GATCWWWWWWWWG-497-488+CATTATAAAG
At2g37410 Species Arabidopsis thaliana Arabidopsis thaliana CARGCW8GATCWWWWWWWWG-497-488-CATTATAAAG
At2g37410 Species Arabidopsis thaliana Arabidopsis thaliana CARGCW8GATCWWWWWWWWG-807-798+CATATATATG
At2g37410 Species Arabidopsis thaliana Arabidopsis thaliana CARGCW8GATCWWWWWWWWG-807-798-CATATATATG
At2g37410 Species Arabidopsis thaliana Arabidopsis thaliana CARGCW8GATCWWWWWWWWG-937-928+CAAAAAATTG
At2g37410 Species Arabidopsis thaliana Arabidopsis thaliana CARGCW8GATCWWWWWWWWG-937-928-CAAAAAATTG
At2g37410 Species Arabidopsis thaliana Arabidopsis thaliana CCA1 binding site motifAAMAATCT-556-549+AACAATCT
At2g37410 Species Arabidopsis thaliana Arabidopsis thaliana MYB4 binding site motifAMCWAMC-77-71-GTTTGGT
At2g37410 Species Arabidopsis thaliana Arabidopsis thaliana TATA-box MotifTATAAA-494-489+TATAAA
At2g37410 Species Arabidopsis thaliana Arabidopsis thaliana W-box promoter motifTTGACY-940-935-AGTCAA
At5g11690 Species Arabidopsis thaliana Arabidopsis thaliana MYB1ATWAACCA-258-253+AAACCA
At5g11690 Species Arabidopsis thaliana Arabidopsis thaliana MYB4 binding site motifAMCWAMC-149-143-GGTAGTT
At5g11690 Species Arabidopsis thaliana Arabidopsis thaliana MYB4 binding site motifAMCWAMC-153-147-GGTTGGT

Sequences (FASTA)