ARC Centre of Excellence for Plant Energy Biology

MPIC — TIM17 CDD Results

Sequences for all species were analysed by CDD (Marchler-Bauer et al. 2011) using default settings. *Columns are described in the CDD documentation.

Domains Genes
Tim17 superfamily 44
PTZ00236 16
3a0801so1tim17 4
QueryHit typePSSM-IDFromToE-ValueBitscoreAccessionShort nameIncompleteSuperfamily
AT1G20350 Species Arabidopsis thalianasuperfamily24301571483.19149e-53170.609cl02381Tim17 superfamily - -
AT2G37410 Species Arabidopsis thalianaspecific17348771471.38237e-56180.239PTZ00236PTZ00236 - cl02381
AT2G37410 Species Arabidopsis thalianasuperfamily24301571471.38237e-56180.239cl02381Tim17 superfamily - -
AT5G11690 Species Arabidopsis thalianasuperfamily243015131261.60814e-40134.785cl02381Tim17 superfamilyC -
Bra005199 Species Brassica rapasuperfamily24301571183.71631e-46152.505cl02381Tim17 superfamilyC -
Bra006109 Species Brassica rapasuperfamily24301511292.37139e-39131.704cl02381Tim17 superfamilyC -
Bra016467 Species Brassica rapasuperfamily24301591436.8455e-36125.541cl02381Tim17 superfamily - -
Bra016468 Species Brassica rapasuperfamily24301551449.69285e-44145.956cl02381Tim17 superfamily - -
Bra016469 Species Brassica rapaspecific17348771441.52973e-54173.305PTZ00236PTZ00236 - cl02381
Bra016469 Species Brassica rapasuperfamily24301571441.52973e-54173.305cl02381Tim17 superfamily - -
Bra030980 Species Brassica rapasuperfamily24301571392.39225e-47155.586cl02381Tim17 superfamily - -
gi|17539600 Species Caenorhabditis elegansspecific13005311727.12683e-95275.564TIGR009803a0801so1tim17 - cl02381
gi|17539600 Species Caenorhabditis eleganssuperfamily24301511727.12683e-95275.564cl02381Tim17 superfamily - -
gi|392899672 Species Caenorhabditis eleganssuperfamily2430151568.09419e-29104.921cl02381Tim17 superfamilyNC -
CMS471CT Species Cyanidioschyzon merolaespecific173487121704.24936e-59186.402PTZ00236PTZ00236 - cl02381
CMS471CT Species Cyanidioschyzon merolaesuperfamily243015121704.24936e-59186.402cl02381Tim17 superfamily - -
Cre10.g452650.t1.2 Species Chlamydomonas reinhardtiisuperfamily243015111264.73074e-44148.267cl02381Tim17 superfamilyC -
Carubv10002239m.g Species Capsella rubellasuperfamily243015131321.48612e-42139.793cl02381Tim17 superfamilyC -
Carubv10010213m.g Species Capsella rubellaspecific173487181586.85012e-61190.639PTZ00236PTZ00236 - cl02381
Carubv10010213m.g Species Capsella rubellasuperfamily243015181586.85012e-61190.639cl02381Tim17 superfamily - -
Carubv10023975m.g Species Capsella rubellaspecific17348771352.39338e-55176.772PTZ00236PTZ00236 - cl02381
Carubv10023975m.g Species Capsella rubellasuperfamily24301571352.39338e-55176.772cl02381Tim17 superfamily - -
Cucsa.116650.1 Species Cucumis sativusspecific17348771412.77197e-54174.076PTZ00236PTZ00236 - cl02381
Cucsa.116650.1 Species Cucumis sativussuperfamily24301571412.77197e-54174.076cl02381Tim17 superfamily - -
Cucsa.288810.1 Species Cucumis sativussuperfamily24301571353.96304e-53170.609cl02381Tim17 superfamily - -
gi|66806813 Species Dictyostelium discoideumspecific17348711434.26149e-55174.076PTZ00236PTZ00236 - cl02381
gi|66806813 Species Dictyostelium discoideumsuperfamily24301511434.26149e-55174.076cl02381Tim17 superfamily - -
Esi0117_0080 Species Ectocarpus siliculosussuperfamily24301541375.90876e-52169.068cl02381Tim17 superfamily - -
Glyma01g01110.1 Species Glycine maxspecific17348771451.3129e-56178.698PTZ00236PTZ00236 - cl02381
Glyma01g01110.1 Species Glycine maxsuperfamily24301571451.3129e-56178.698cl02381Tim17 superfamily - -
Glyma16g08520.2 Species Glycine maxspecific17348771451.6897e-55175.616PTZ00236PTZ00236 - cl02381
Glyma16g08520.2 Species Glycine maxsuperfamily24301571451.6897e-55175.616cl02381Tim17 superfamily - -
Glyma20g02120.1 Species Glycine maxspecific17348771459.7956e-57179.468PTZ00236PTZ00236 - cl02381
Glyma20g02120.1 Species Glycine maxsuperfamily24301571459.7956e-57179.468cl02381Tim17 superfamily - -
gi|269784613 Species Homo sapiensspecific13005312217.05945e-73221.251TIGR009803a0801so1tim17 - cl02381
gi|269784613 Species Homo sapienssuperfamily24301512217.05945e-73221.251cl02381Tim17 superfamily - -
gi|5454120 Species Homo sapienssuperfamily24301511715.71808e-61188.894cl02381Tim17 superfamily - -
medicago|tim17 contig_66276:1037..2036- Species Medicago truncatulasuperfamily24301571501.49822e-50163.29cl02381Tim17 superfamily - -
gi|85095902 Species Neurospora crassaspecific13005321471.47266e-64197.368TIGR009803a0801so1tim17 - cl02381
gi|85095902 Species Neurospora crassasuperfamily24301521471.47266e-64197.368cl02381Tim17 superfamily - -
LOC_Os03g30200.1 Species Oryza sativasuperfamily24301561084.51827e-40136.326cl02381Tim17 superfamilyC -
LOC_Os03g30220.1 Species Oryza sativasuperfamily2430157572.67563e-0748.5006cl02381Tim17 superfamilyN -
LOC_Os05g07250.1 Species Oryza sativasuperfamily2430152273521.22277e-41145.956cl02381Tim17 superfamily - -
LOC_Os07g41330.1 Species Oryza sativasuperfamily24301571355.64657e-51164.831cl02381Tim17 superfamily - -
Phpat.019G021000.1 Species Physcomitrella patensspecific17348771383.14139e-67207.203PTZ00236PTZ00236 - cl02381
Phpat.019G021000.1 Species Physcomitrella patenssuperfamily24301571383.14139e-67207.203cl02381Tim17 superfamily - -
Potri.006G165000.1 Species Populus trichocarpaspecific17348771544.30399e-55175.616PTZ00236PTZ00236 - cl02381
Potri.006G165000.1 Species Populus trichocarpasuperfamily24301571544.30399e-55175.616cl02381Tim17 superfamily - -
Potri.008G176500.1 Species Populus trichocarpaspecific17348771411.14506e-55176.772PTZ00236PTZ00236 - cl02381
Potri.008G176500.1 Species Populus trichocarpasuperfamily24301571411.14506e-55176.772cl02381Tim17 superfamily - -
Potri.018G087900.1 Species Populus trichocarpasuperfamily24301571411.56899e-53171.379cl02381Tim17 superfamily - -
29912.m005433|29912.t000159 Species Ricinus communissuperfamily24301571141.03803e-43145.956cl02381Tim17 superfamilyC -
YJL143W Species Saccharomyces cerevisiaespecific13005321583.95937e-85250.141TIGR009803a0801so1tim17 - cl02381
YJL143W Species Saccharomyces cerevisiaesuperfamily24301521583.95937e-85250.141cl02381Tim17 superfamily - -
89766 Species Selaginella moellendorffiispecific17348751354.11299e-68209.514PTZ00236PTZ00236 - cl02381
89766 Species Selaginella moellendorffiisuperfamily24301551354.11299e-68209.514cl02381Tim17 superfamily - -
PGSC0003DMG400030451|PGSC0003DMT400078245 Species Solanum tuberosumspecific17348771412.94729e-55176.387PTZ00236PTZ00236 - cl02381
PGSC0003DMG400030451|PGSC0003DMT400078245 Species Solanum tuberosumsuperfamily24301571412.94729e-55176.387cl02381Tim17 superfamily - -
Vocar20010628m.g Species Volvox carterisuperfamily243015111155.69425e-42141.719cl02381Tim17 superfamilyC -
GSVIVG01015301001|GSVIVT01015301001 Species Vitis viniferaspecific17348771353.64318e-55175.231PTZ00236PTZ00236 - cl02381
GSVIVG01015301001|GSVIVT01015301001 Species Vitis viniferasuperfamily24301571353.64318e-55175.231cl02381Tim17 superfamily - -
GRMZM2G167463_T01 Species Zea mayssuperfamily24301571432.04619e-52168.683cl02381Tim17 superfamily - -
GRMZM2G321404_T01 Species Zea mayssuperfamily24301571151.48064e-43145.956cl02381Tim17 superfamilyC -
GRMZM2G437270_T01 Species Zea mayssuperfamily2430151352.80322e-0745.419cl02381Tim17 superfamilyNC -

Sequences (FASTA)