ARC Centre of Excellence for Plant Energy Biology

MPIC — TIM13 Transmembrane Helix Domain Predictions

Num_PredHel indicates the number of predicted transmembrane helix domains calculated by DAS and TMHMM predictors (for methods, see MPIC paper). A tally of both predictors is shown first.

Num_PredHel Frequency
1 3

1 predicted Species DAS_Num_PredHelTMHMM_Num_PredHel
AT1G61570 Species Arabidopsis thaliana Arabidopsis thaliana
Bra003766 Species Brassica rapa Brassica rapa
Bra015863 Species Brassica rapa Brassica rapa 1
gi|17506427 Species Caenorhabditis elegans Caenorhabditis elegans
CMB148C Species Cyanidioschyzon merolae Cyanidioschyzon merolae
g15745.t1 Species Chlamydomonas reinhardtii Chlamydomonas reinhardtii
Carubv10021223 Species Capsella rubella Capsella rubella
Cucsa.193350 Species Cucumis sativus Cucumis sativus
Eucgr.L00349 Species Eucalyptus grandis Eucalyptus grandis
Glyma08g48290 Species Glycine max Glycine max
Glyma13g10250 Species Glycine max Glycine max
gi|11024700 Species Homo sapiens Homo sapiens
Medtr3g080670 Species Medicago truncatula Medicago truncatula
gi|85104848 Species Neurospora crassa Neurospora crassa 11
gi|85109802 Species Neurospora crassa Neurospora crassa
LOC_Os02g45820 Species Oryza sativa Oryza sativa
Phpat.025G038900 Species Physcomitrella patens Physcomitrella patens
Potri.001G452100 Species Populus trichocarpa Populus trichocarpa
Potri.011G149800 Species Populus trichocarpa Populus trichocarpa
30068.t000104 Species Ricinus communis Ricinus communis
YGR181W Species Saccharomyces cerevisiae Saccharomyces cerevisiae
228905 Species Selaginella moellendorffii Selaginella moellendorffii
PGSC0003DMG400012109 Species Solanum tuberosum Solanum tuberosum
Vocar20012438m Species Volvox carteri Volvox carteri
GSVIVG01019698001 Species Vitis vinifera Vitis vinifera
GRMZM2G058432 Species Zea mays Zea mays

Sequences (FASTA)