ARC Centre of Excellence for Plant Energy Biology

MPIC — TIM13 Athena Promoter Motif Predictions

Putative and known regulatory elements within upstream regions of each gene were obtained from, and enable analysis of co-regulated genes sourced from, Athena: Arabidopsis thaliana a resource for rapid visualization and systematic analysis of Arabidopsis promoter sequences (O’Connor et al. 2005).

Locus Species Motif Pattern Start End Sense Sequence
At1g61570 Species Arabidopsis thaliana Arabidopsis thaliana AtMYC2 BS in RD22CACATG-352-347-CATGTG
At1g61570 Species Arabidopsis thaliana Arabidopsis thaliana BoxII promoter motifGGTTAA-785-780-TTAACC
At1g61570 Species Arabidopsis thaliana Arabidopsis thaliana MYB binding site promoterMACCWAMC-982-975+AACCTAAC
At1g61570 Species Arabidopsis thaliana Arabidopsis thaliana MYB1ATWAACCA-142-137-TGGTTA
At1g61570 Species Arabidopsis thaliana Arabidopsis thaliana MYB1LEPRGTTAGTT-727-721+GTTAGTT
At1g61570 Species Arabidopsis thaliana Arabidopsis thaliana MYB2ATTAACTG-729-724-CAGTTA
At1g61570 Species Arabidopsis thaliana Arabidopsis thaliana MYB4 binding site motifAMCWAMC-727-721-GTTAGTT
At1g61570 Species Arabidopsis thaliana Arabidopsis thaliana MYB4 binding site motifAMCWAMC-981-975+ACCTAAC
At1g61570 Species Arabidopsis thaliana Arabidopsis thaliana MYCATERD1CATGTG-352-347+CATGTG
At1g61570 Species Arabidopsis thaliana Arabidopsis thaliana T-box promoter motifACTTTG-320-315-CAAAGT
At1g61570 Species Arabidopsis thaliana Arabidopsis thaliana TELO-box promoter motifAAACCCTAA-10-2-TTAGGGTTT
At1g61570 Species Arabidopsis thaliana Arabidopsis thaliana W-box promoter motifTTGACY-165-160-AGTCAA
At1g61570 Species Arabidopsis thaliana Arabidopsis thaliana W-box promoter motifTTGACY-629-624+TTGACC
At1g61570 Species Arabidopsis thaliana Arabidopsis thaliana W-box promoter motifTTGACY-810-805+TTGACC
At1g61570 Species Arabidopsis thaliana Arabidopsis thaliana W-box promoter motifTTGACY-906-901+TTGACC

Sequences (FASTA)