MPIC
Sequences for Brassica rapa were analysed by InterPro (Zdobnov and Apweiler 2001) using default settings.
| Database | Detected | Description | Start | End | E-Value |
|---|---|---|---|---|---|
| InterPro | IPR001251 | CRAL-TRIO domain: | |||
| Gene3D | G3DSA:3.40.525.10 | 157 | 351 | 1.6E-47 | |
| Pfam | PF00650 | CRAL/TRIO domain | 176 | 328 | 3.3E-36 |
| ProSiteProfiles | PS50191 | CRAL-TRIO lipid binding domain profile. | 169 | 333 | 0.0 |
| SMART | SM00516 | Domain in homologues of a S. cerevisiae phosphatidylinositol transfer protein (Sec14p) | 175 | 330 | 1.400005069E-49 |
| SUPERFAMILY | SSF52087 | 169 | 348 | 0.0 | |
| InterPro | IPR004217 | Tim10/DDP family zinc finger: | |||
| Gene3D | G3DSA:1.10.287.810 | 23 | 76 | 2.5E-19 | |
| Pfam | PF02953 | Tim10/DDP family zinc finger | 20 | 75 | 2.5E-19 |
| SUPERFAMILY | SSF144122 | 30 | 89 | 0.0 | |
| InterPro | IPR011074 | CRAL/TRIO, N-terminal domain: | |||
| Pfam | PF03765 | CRAL/TRIO, N-terminal domain | 109 | 155 | 5.9E-9 |
| SMART | SM01100 | CRAL/TRIO, N-terminal domain | 130 | 155 | 9.300000485E-10 |
| SUPERFAMILY | SSF46938 | 96 | 171 | 0.0 | |
| InterPro | No IPR | Unintegrated signatures: | |||
| Gene3D | G3DSA:1.10.8.20 | 97 | 156 | 1.8E-13 | |
| PANTHER | PTHR10174 | 19 | 361 | 0.0 | |
| PANTHER | PTHR10174:SF93 | 19 | 361 | 0.0 | |
| Phobius | CYTOPLASMIC_DOMAIN | Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. | 90 | 384 | - |
| Phobius | NON_CYTOPLASMIC_DOMAIN | Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. | 1 | 69 | - |
| Phobius | TRANSMEMBRANE | Region of a membrane-bound protein predicted to be embedded in the membrane. | 70 | 89 | - |
