ARC Centre of Excellence for Plant Energy Biology

MPIC — SAM50 Transmembrane Helix Domain Predictions

Num_PredHel indicates the number of predicted transmembrane helix domains calculated by DAS and TMHMM predictors (for methods, see MPIC paper). A tally of both predictors is shown first.

Num_PredHel Frequency
1 5

1 predicted Species DAS_Num_PredHelTMHMM_Num_PredHel
AT3G11070 Species Arabidopsis thaliana Arabidopsis thaliana
AT5G05520 Species Arabidopsis thaliana Arabidopsis thaliana
Bra001389 Species Brassica rapa Brassica rapa
Bra009118 Species Brassica rapa Brassica rapa
Bra034868 Species Brassica rapa Brassica rapa
gi|17552460 Species Caenorhabditis elegans Caenorhabditis elegans
CMO061CT Species Cyanidioschyzon merolae Cyanidioschyzon merolae
Cre06.g308900 Species Chlamydomonas reinhardtii Chlamydomonas reinhardtii
Carubv10000717 Species Capsella rubella Capsella rubella
Carubv10013427 Species Capsella rubella Capsella rubella
Cucsa.137480 Species Cucumis sativus Cucumis sativus
Eucgr.J00180 Species Eucalyptus grandis Eucalyptus grandis
Esi0503_0006 Species Ectocarpus siliculosus Ectocarpus siliculosus 11
Glyma02g43160 Species Glycine max Glycine max
Glyma11g35531 Species Glycine max Glycine max
Glyma14g06250 Species Glycine max Glycine max
gi|225543166 Species Homo sapiens Homo sapiens
Medtr3g071450 Species Medicago truncatula Medicago truncatula
Medtr5g083050 Species Medicago truncatula Medicago truncatula
gi|85098006 Species Neurospora crassa Neurospora crassa
LOC_Os05g39390 Species Oryza sativa Oryza sativa
LOC_Os11g01490 Species Oryza sativa Oryza sativa
LOC_Os12g01500 Species Oryza sativa Oryza sativa
Phpat.023G045500 Species Physcomitrella patens Physcomitrella patens
Phpat.024G008700 Species Physcomitrella patens Physcomitrella patens
Potri.008G071800 Species Populus trichocarpa Populus trichocarpa
Potri.010G185600 Species Populus trichocarpa Populus trichocarpa
29814.t000035 Species Ricinus communis Ricinus communis 1
YNL026W Species Saccharomyces cerevisiae Saccharomyces cerevisiae
139554 Species Selaginella moellendorffii Selaginella moellendorffii
PGSC0003DMG400008029 Species Solanum tuberosum Solanum tuberosum
Vocar20007806 Species Volvox carteri Volvox carteri 1
GSVIVG01032775001 Species Vitis vinifera Vitis vinifera
AC197705.4_FG007 Species Zea mays Zea mays 1
GRMZM2G057557 Species Zea mays Zea mays
GRMZM2G062080 Species Zea mays Zea mays
GRMZM5G832582 Species Zea mays Zea mays

Sequences (FASTA)